RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RAB39BQ96DA2 213 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 TIMD4Q96H15 378 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 G6PC2Q9NQR9 355 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 PLEK2Q9NYT0 353 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 MAGEL2Q9UJ55 1249 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 METRNQ9UJH8 293 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 V9GYQ6 96 aa17.21■□□□□ 0.35
NCKIPSD-206ENST00000439518 PLPP2O43688 288 aa17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 TIMM8AO60220 97 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 KITLGP21583 273 aa17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 RPS6KA3P51812 740 aa17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 CCDC92Q53HC0 331 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 SAMD4BQ5PRF9 694 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 PGAM4Q8N0Y7 254 aa17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 SLC7A6Q92536 515 aa17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 METTL17Q9H7H0 456 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 ATPIF1Q9UII2 106 aa17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 PURGQ9UJV8 347 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 WNK2Q9Y3S1 2297 aa17.2■□□□□ 0.34
NCKIPSD-206ENST00000439518 DCTN6O00399 190 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 GADD45GO95257 159 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 MSX2P35548 267 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 TNFAIP6P98066 277 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 SLC3A1Q07837 685 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 FAHD2BQ6P2I3 314 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 Q6ZR03 302 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 C1orf229Q6ZS94 237 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 OR1F12Q8NHA8 337 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 HAVCR1Q96D42 359 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 FAHD2AQ96GK7 314 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 TSSK2Q96PF2 358 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 ERMAPQ96PL5 475 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 ARL8BQ9NVJ2 186 aa17.19■□□□□ 0.34
NCKIPSD-206ENST00000439518 IGLV1-36A0A0B4J1U3 117 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 ARPC2O15144 300 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 ARPC3O15145 178 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 RER1O15258 196 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 PPP1R3DO95685 299 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 PNPP00491 289 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 FPR3P25089 353 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 HIST1H3AP68431 136 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 SPIBQ01892 262 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 RFX4Q33E94 735 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 HIST2H3PS2Q5TEC6 136 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 HIST2H3AQ71DI3 136 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 PIGWQ7Z7B1 504 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 FANK1Q8TC84 345 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 CMBLQ96DG6 245 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 NSMCE2Q96MF7 247 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 COG8Q96MW5 612 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 CDRT15Q96T59 188 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 DCAF16Q9NXF7 216 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 TAGLN3Q9UI15 199 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 LHFPL6Q9Y693 200 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 NBEAL1Q6ZS30 2694 aa17.18■□□□□ 0.34
NCKIPSD-206ENST00000439518 TANC2Q9HCD6 1990 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 J3QW42 95 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 GPANK1O95872 356 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 AVPP01185 164 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 DBHP09172 617 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 CRABP1P29762 137 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 SLC6A6P31641 620 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 HNRNPA0Q13151 305 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 PGM2L1Q6PCE3 622 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 DNM1P34Q6PK57 102 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 PTP4A1Q93096 173 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 DCLRE1CQ96SD1 692 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 GAL3ST1Q99999 423 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 OR52D1Q9H346 318 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 IL1RAPQ9NPH3 570 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 B9D1Q9UPM9 204 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 ARL2BPQ9Y2Y0 163 aa17.17■□□□□ 0.34
NCKIPSD-206ENST00000439518 A0A0A6YYJ9 748 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 RAC2P15153 192 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 GSSP48637 474 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 RGS6P49758 472 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 ERFP50548 548 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 GYS2P54840 703 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 MEP1BQ16820 701 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 SPATS1Q496A3 300 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 C1orf94Q6P1W5 598 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 SHQ1Q6PI26 577 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 OR6V1Q8N148 313 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 GJC3Q8NFK1 279 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 OR2Z1Q8NG97 314 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 MCUR1Q96AQ8 359 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 SAMD8Q96LT4 415 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 NMNAT3Q96T66 252 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 TMPRSS13Q9BYE2 586 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 OCEL1Q9H607 264 aa17.16■□□□□ 0.34
NCKIPSD-206ENST00000439518 TENM1Q9UKZ4 2725 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 A0A0G2JMP0 313 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 A0A0X1KG70 313 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 OR10H3O60404 316 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 IGHV2-70P01814 119 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 FABP3P05413 133 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 HIST1H1CP16403 213 aaKnown RBP17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 TNFSF4P23510 183 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 DBPQ10586 325 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 COX10Q12887 443 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms