RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 OR2AJ1Q8NGZ0 328 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 OR1F12Q8NHA8 337 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 RIBC2Q9H4K1 309 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 CYB5R1Q9UHQ9 305 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 GDF2Q9UK05 429 aaPredicted RBP16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 NDRG4Q9ULP0 352 aaKnown RBP16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 FZR1Q9UM11 496 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 COMMD3-BMI1R4GMX3 469 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 TMEM129A0AVI4 362 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 OR6C6A6NF89 314 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 B9A039 149 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 M0R129 80 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 GLCEO94923 617 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 LCKP06239 509 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 RAD52P43351 418 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 ATP5J2P56134 94 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 ERVS71-1P61550 626 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 RPS23P62266 143 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 EFNB3Q15768 340 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 CFAP77Q6ZQR2 320 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 CXXC5Q7LFL8 322 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 ZNF101Q8IZC7 436 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 CBR4Q8N4T8 237 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 BBS1Q8NFJ9 593 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 MRPL24Q96A35 216 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 TRMT61AQ96FX7 289 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 MRPL37Q9BZE1 423 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 PLK3Q9H4B4 646 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 USE1Q9NZ43 259 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 EIF3KQ9UBQ5 218 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 ENOPH1Q9UHY7 261 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 KCNG2Q9UJ96 466 aa16.76■□□□□ 0.27
SEMA3B-206ENST00000439487 ZNF593O00488 134 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 PRKYO43930 277 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 NDUFS7O75251 213 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 ALPLP05186 524 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 DBHP09172 617 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 SPARCP09486 303 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 ENTPD1P49961 510 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 BLVRAP53004 296 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 SNRPD2P62316 118 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 KLHL12Q53G59 568 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 ELFN2Q5R3F8 820 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 C12orf73Q69YU5 71 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 RGS7BPQ6MZT1 257 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 LRP11Q86VZ4 500 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 KRTAP1-3Q8IUG1 177 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 OR1J1Q8NGS3 322 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 ZMYND19Q96E35 227 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 MAP6Q96JE9 813 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 C4orf45Q96LM5 186 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 SYT3Q9BQG1 590 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 GABARAPL3Q9BY60 117 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 BCL2L14Q9BZR8 327 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 GRIP1Q9Y3R0 1128 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 PMF1-BGLAPU3KQ54 211 aa16.75■□□□□ 0.27
SEMA3B-206ENST00000439487 F8P00451 2351 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 ACANP16112 2415 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 NGFP01138 241 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 GSTT1P30711 240 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 ALDH3A2P51648 485 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 ZIK1Q3SY52 487 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 RFPL4BQ6ZWI9 263 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 ERI1Q8IV48 349 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 TCEANCQ8N8B7 351 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 ABHD4Q8TB40 342 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 PITX2Q99697 317 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 DOK1Q99704 481 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 COQ7Q99807 217 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 SLC29A1Q99808 456 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 C9orf16Q9BUW7 83 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 PRRG3Q9BZD7 231 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 HDHD2Q9H0R4 259 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 DUSP13Q9UII6 198 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 ORC6Q9Y5N6 252 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 FLNAP21333 2647 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 HIVEP1P15822 2718 aa16.74■□□□□ 0.27
SEMA3B-206ENST00000439487 TLX2O43763 284 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 ABHD16AO95870 558 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 IGHV4-39P01824 125 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 BMP4P12644 408 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 SLC2A5P22732 501 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 RPS7P62081 194 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 RSPO1Q2MKA7 263 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 TEX30Q5JUR7 227 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 Q5PR19 223 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 SPATA46Q5T0L3 261 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 DCXRQ7Z4W1 244 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 BCDIN3DQ7Z5W3 292 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 OR10S1Q8NGN2 331 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 OR6N2Q8NGY6 317 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 INTS14Q96SY0 518 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 ELOVL3Q9HB03 270 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 PNRC2Q9NPJ4 139 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 MYEF2Q9P2K5 600 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 ATPIF1Q9UII2 106 aa16.73■□□□□ 0.27
SEMA3B-206ENST00000439487 H7C417 338 aa16.72■□□□□ 0.27
SEMA3B-206ENST00000439487 PRODHO43272 600 aa16.72■□□□□ 0.27
SEMA3B-206ENST00000439487 CLPTM1O96005 669 aa16.72■□□□□ 0.27
SEMA3B-206ENST00000439487 EFNB1P98172 346 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms