RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ODF4Q2M2E3 257 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 SCGB2B2Q4G0G5 96 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 LEG1Q6P5S2 330 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 ZCCHC12Q6PEW1 402 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 SLC25A45Q8N413 288 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 SCARF2Q96GP6 870 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 APOOQ9BUR5 198 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 ULBP3Q9BZM4 244 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 COMMD4Q9H0A8 199 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 RNF122Q9H9V4 155 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 ARPC3O15145 178 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 PRICKLE3O43900 615 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 AK1P00568 194 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 CD74P04233 296 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 HLA-GP17693 338 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 PTAFRP25105 342 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 GABRA3P34903 492 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 RABIFP47224 123 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 PJVKQ0ZLH3 352 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 PRRT3Q5FWE3 981 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 LINC00114Q6XXX2 140 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 IL34Q6ZMJ4 242 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 PARGQ86W56 976 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 BPIFB2Q8N4F0 458 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 CDRT4Q8N9R6 151 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 OR13C8Q8NGS7 320 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 OR2G2Q8NGZ5 317 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 GPR148Q8TDV2 347 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 CPNE2Q96FN4 548 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 ZNF285Q96NJ3 590 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 MKKSQ9NPJ1 570 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 SLC17A5Q9NRA2 495 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 IKZF2Q9UKS7 526 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 FAM96BQ9Y3D0 163 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 UBE2CO00762 179 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 TO15178 435 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 ZNF208O43345 1280 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 PGAM2P15259 253 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 NME1P15531 152 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 ZBTB25P24278 435 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 PEBP1P30086 187 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 ALG11Q2TAA5 492 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 GFOD2Q3B7J2 385 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 NKAPLQ5M9Q1 402 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 C5orf46Q6UWT4 87 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 LYG2Q86SG7 212 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 NAA40Q86UY6 237 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 BAP18Q8IXM2 172 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 SLC30A7Q8NEW0 376 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 FAM174AQ8TBP5 190 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 TMED6Q8WW62 240 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 GAL3ST3Q96A11 431 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 KLHDC7BQ96G42 594 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 TSSK2Q96PF2 358 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 STACQ99469 402 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 SLC6A7Q99884 636 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 NRIP2Q9BQI9 281 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 OR51M1Q9H341 326 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 FGF22Q9HCT0 170 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 RCC2Q9P258 522 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 VSIG4Q9Y279 399 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 FARSAQ9Y285 508 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 C1orf196B1AJZ1 125 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 ZNF736B4DX44 427 aaPredicted RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 DKK1O94907 266 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 ZNF28P17035 718 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 CFPP27918 469 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 CDKN2AP42771 156 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 YPEL5P62699 121 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 AIMP2Q13155 320 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 SGCGQ13326 291 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 NFATC4Q14934 902 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 MST1LQ2TV78 715 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 ZNF542PQ5EBM4 170 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 USP53Q70EK8 1073 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 ZNF627Q7L945 461 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 OR52E1Q8NGJ3 308 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 PHOSPHO1Q8TCT1 267 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 MCHR2Q969V1 340 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 ARL5BQ96KC2 179 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 LMF1Q96S06 567 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 RAB11FIP5Q9BXF6 653 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 SELENOIQ9C0D9 397 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 SEMA6CQ9H3T2 930 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 SEBOXQ9HB31 216 aaPredicted RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 MIOXQ9UGB7 285 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 PCOLCE2Q9UKZ9 415 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 TMEM212A6NML5 194 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 SLC17A2O00624 439 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 DNAJB6O75190 326 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 CER1O95813 267 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 CYB5AP00167 134 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 CSN2P05814 226 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 CEACAM5P06731 702 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 S100PP25815 95 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 EXOSC7Q15024 291 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 EIF2S3LQ2VIR3 472 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 KIRREL2Q6UWL6 708 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 PAQR4Q8N4S7 273 aaPredicted RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 OR4K17Q8NGC6 315 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms