RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 IGFN1Q86VF2 1251 aa12.33□□□□□ -0.44
HDAC8-213ENST00000436675 SLC30A8Q8IWU4 369 aa12.33□□□□□ -0.44
HDAC8-213ENST00000436675 TMEM86BQ8N661 226 aa12.33□□□□□ -0.44
HDAC8-213ENST00000436675 HAVCR1Q96D42 359 aa12.33□□□□□ -0.44
HDAC8-213ENST00000436675 FAM71F1Q96KD3 344 aaPredicted RBP12.33□□□□□ -0.44
HDAC8-213ENST00000436675 TXNIPQ9H3M7 391 aa12.33□□□□□ -0.44
HDAC8-213ENST00000436675 TBCCD1Q9NVR7 557 aa12.33□□□□□ -0.44
HDAC8-213ENST00000436675 PTTG3PQ9NZH4 202 aa12.33□□□□□ -0.44
HDAC8-213ENST00000436675 NDRG4Q9ULP0 352 aaKnown RBP12.33□□□□□ -0.44
HDAC8-213ENST00000436675 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 TMEM120BA0PK00 339 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 C12orf71A8MTZ7 269 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 C22orf46C9J442 243 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 G3V4G9 280 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 PIP5K1CO60331 668 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 DOK2O60496 412 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 SHOX2O60902 331 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-213ENST00000436675 CLPXO76031 633 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 IGHV4-59P01825 116 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 MSR1P21757 451 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 PROK1P58294 105 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 GUCY1A3Q02108 690 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 ZNF404Q494X3 552 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 AGKQ53H12 422 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 WDR25Q64LD2 544 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-213ENST00000436675 OR2T2Q6IF00 324 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 EPGNQ6UW88 154 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 NLRC3Q7RTR2 1065 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 TBC1D15Q8TC07 691 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 SLC26A7Q8TE54 656 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 SSMEM1Q8WWF3 244 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 TAMM41Q96BW9 452 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 ALG12Q9BV10 488 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 USH1CQ9Y6N9 552 aa12.32□□□□□ -0.44
HDAC8-213ENST00000436675 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 GMNCA6NCL1 334 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 F5H5P2 479 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 H7C1C5 153 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 IFNL4K9M1U5 179 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 NR2C1P13056 603 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 MTPNP58546 118 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 TAS2R41P59536 307 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 RPL27P61353 136 aaKnown RBP12.31□□□□□ -0.44
HDAC8-213ENST00000436675 LCN6P62502 163 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 ALG10Q5BKT4 473 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 TNFAIP8L3Q5GJ75 292 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 DLEU7Q6UYE1 221 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 TMEM239Q8WW34 195 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 DYRK2Q92630 601 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 PTP4A1Q93096 173 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 MAGEB18Q96M61 343 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 PCDHAC1Q9H158 963 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.31□□□□□ -0.44
HDAC8-213ENST00000436675 GMEB1Q9Y692 573 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 POMT1Q9Y6A1 747 aa12.31□□□□□ -0.44
HDAC8-213ENST00000436675 V9GYY5 206 aaPredicted RBP12.31□□□□□ -0.44
HDAC8-213ENST00000436675 KMT2CQ8NEZ4 4911 aaKnown RBP12.3□□□□□ -0.44
HDAC8-213ENST00000436675 CENPVL3A0A0U1RRI6 287 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 C3orf80F5H4A9 247 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 TNFRSF13BO14836 293 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-213ENST00000436675 POLR3GO15318 223 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-213ENST00000436675 SGCEO43556 437 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 ENSAO43768 121 aaKnown RBP12.3□□□□□ -0.44
HDAC8-213ENST00000436675 TOX4O94842 621 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 CPT2P23786 658 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 CFHR2P36980 270 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 PMELP40967 661 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 SRP9P49458 86 aaKnown RBP12.3□□□□□ -0.44
HDAC8-213ENST00000436675 CTXN1P60606 82 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 HOXA4Q00056 320 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-213ENST00000436675 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 PDZD9Q8IXQ8 264 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 MICU2Q8IYU8 434 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 BHLHE23Q8NDY6 225 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 TECTBQ96PL2 329 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 POLE4Q9NR33 117 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 ACOXLQ9NUZ1 547 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 KIF17Q9P2E2 1029 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 SH3GLB1Q9Y371 365 aa12.3□□□□□ -0.44
HDAC8-213ENST00000436675 LRRC30A6NM36 301 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 P2RY10O00398 339 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 MLNRO43193 412 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 VIMP08670 466 aaKnown RBP12.29□□□□□ -0.44
HDAC8-213ENST00000436675 DBHP09172 617 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 CSF1P09603 554 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 TSPAN19P0C672 248 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 COX5BP10606 129 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 RAC2P15153 192 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 MRPL19P49406 292 aaKnown RBP12.29□□□□□ -0.44
HDAC8-213ENST00000436675 PRSS12P56730 875 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 BPIFB3P59826 476 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 SCRN3Q0VDG4 424 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 PIN1Q13526 163 aaPredicted RBP12.29□□□□□ -0.44
HDAC8-213ENST00000436675 C2orf68Q2NKX9 166 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 BEAN1Q3B7T3 259 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 ZNF841Q6ZN19 808 aa12.29□□□□□ -0.44
HDAC8-213ENST00000436675 Q6ZPA2 131 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms