RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 LGALS12Q96DT0 336 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 SLAMF6Q96DU3 332 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 COPS4Q9BT78 406 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 WNT5BQ9H1J7 359 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 CDH20Q9HBT6 801 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 AMBNQ9NP70 447 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 PLCXD1Q9NUJ7 323 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 DDX28Q9NUL7 540 aaKnown RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 MRPS18AQ9NVS2 196 aaKnown RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 NPAP1Q9NZP6 1156 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 KCNN3Q9UGI6 736 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 EXOGQ9Y2C4 368 aaKnown RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 LRCH1Q9Y2L9 728 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 TPRKBQ9Y3C4 175 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 IGHV1-18A0A0C4DH31 117 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 SYNGR3O43761 229 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 APOL3O95236 402 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 CECR9P0C854 216 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 PSKH1P11801 424 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 ZNF14P17017 642 aaPredicted RBP9.57□□□□□ -0.88
CHD4-202ENST00000430771 MYL12AP19105 171 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 ALOX5APP20292 161 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 STOMP27105 288 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 DCKP27707 260 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 HSD11B1P28845 292 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 GDI2P50395 445 aaKnown RBP9.57□□□□□ -0.88
CHD4-202ENST00000430771 ACTA2P62736 377 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 ACTG2P63267 376 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 EGR3Q06889 387 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 RAB39AQ14964 217 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 TAF13Q15543 124 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 CCDC92Q53HC0 331 aaPredicted RBP9.57□□□□□ -0.88
CHD4-202ENST00000430771 RBM48Q5RL73 367 aaKnown RBP9.57□□□□□ -0.88
CHD4-202ENST00000430771 TMEM154Q6P9G4 183 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 AHSA2Q719I0 299 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 RHOUQ7L0Q8 258 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 KRT77Q7Z794 578 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 ZNF786Q8N393 782 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 ZNF540Q8NDQ6 660 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 OR1F12Q8NHA8 337 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 THEM6Q8WUY1 208 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 RNF133Q8WVZ7 376 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 SPTSSAQ969W0 71 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 MAP6Q96JE9 813 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 DCLRE1CQ96SD1 692 aaKnown RBP9.57□□□□□ -0.88
CHD4-202ENST00000430771 TBX5Q99593 518 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 ABHD6Q9BV23 337 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 JAM3Q9BX67 310 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 MROQ9BYG7 248 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 NIPAL2Q9H841 368 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 PNRC2Q9NPJ4 139 aaKnown RBP9.57□□□□□ -0.88
CHD4-202ENST00000430771 IKZF2Q9UKS7 526 aa9.57□□□□□ -0.88
CHD4-202ENST00000430771 ANKHD1Q8IWZ3 2542 aaKnown RBP9.57□□□□□ -0.88
CHD4-202ENST00000430771 LRRK2Q5S007 2527 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 DAPL1A0PJW8 107 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 XPNPEP2O43895 674 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 IGHA1P01876 353 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 CRYAAP02489 173 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 APOC1P02654 83 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 KRT8P05787 483 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 CELA3BP08861 270 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 H2BFMP0C1H6 154 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 CD40P25942 277 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 APEX1P27695 318 aaKnown RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 GABARAPL2P60520 117 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 GALK2Q01415 458 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 NAAAQ02083 359 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 ARL9Q6T311 187 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 ZNF322Q6U7Q0 402 aaPredicted RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 UNQ6126/PRO20091Q6UXV3 157 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 C22orf34Q6ZV56 151 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 ZNF584Q8IVC4 421 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 STX19Q8N4C7 294 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 ACBD7Q8N6N7 88 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 OR52I1Q8NGK6 324 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 MYDGFQ969H8 173 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 TMEM80Q96HE8 168 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 ZNF75AQ96N20 296 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 OR8B4Q96RC9 309 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 C1QTNF6Q9BXI9 259 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 FGF20Q9NP95 211 aaPredicted RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 CENPMQ9NSP4 180 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 CHCHD3Q9NX63 227 aaKnown RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 PSORS1C1Q9UIG5 152 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 DIMT1Q9UNQ2 313 aaKnown RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 COPS3Q9UNS2 423 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 KLHDC2Q9Y2U9 406 aa9.56□□□□□ -0.88
CHD4-202ENST00000430771 EXOSC1Q9Y3B2 195 aaKnown RBP9.56□□□□□ -0.88
CHD4-202ENST00000430771 IGHV2OR16-5A0A0B4J2B6 119 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 A0A1W2PQL4 384 aaPredicted RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 C5orf49A4QMS7 147 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 J3QRE1 110 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 J3QW42 95 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 M0R135 149 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 ABCD4O14678 606 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 MYL12BO14950 172 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 ZNF254O75437 659 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 CD3EP07766 207 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms