RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TMEM178BH3BS89 294 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 AHCYL1O43865 530 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 DOK2O60496 412 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 CYB5R3P00387 301 aaPredicted RBP13.88□□□□□ -0.19
VARS-216ENST00000428445 DBHP09172 617 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 WNT2P09544 360 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 COX5BP10606 129 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 ZNF26P17031 533 aaPredicted RBP13.88□□□□□ -0.19
VARS-216ENST00000428445 MDKP21741 143 aaPredicted RBP13.88□□□□□ -0.19
VARS-216ENST00000428445 RAP1BP61224 184 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 RAP1AP62834 184 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 PAX8Q06710 450 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 TMEM155Q4W5P6 130 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 FAM201AQ5SY85 155 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 LEG1Q6P5S2 330 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 TREML4Q6UXN2 200 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 VASH1Q7L8A9 365 aaPredicted RBP13.88□□□□□ -0.19
VARS-216ENST00000428445 VTCN1Q7Z7D3 282 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 ATG16L2Q8NAA4 619 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 Q96M85 177 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 MRI1Q9BV20 369 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 MAN2C1Q9NTJ4 1040 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 TBCCD1Q9NVR7 557 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 FFAR1O14842 300 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 RNASE1P07998 156 aaKnown RBP13.87□□□□□ -0.19
VARS-216ENST00000428445 SELEP16581 610 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 TNFRSF1AP19438 455 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 GSTM3P21266 225 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 KITLGP21583 273 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 TNFSF4P23510 183 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 GPR4P46093 362 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 SLC9A3P48764 834 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 PRSS12P56730 875 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 DBPQ10586 325 aaPredicted RBP13.87□□□□□ -0.19
VARS-216ENST00000428445 OAFQ86UD1 273 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 FAM156AQ8NDB6 213 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 OR10AD1Q8NGE0 317 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 OR52E2Q8NGJ4 325 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 HAVCR1Q96D42 359 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 PRRC1Q96M27 445 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 GPA33Q99795 319 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 RERGLQ9H628 205 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 GCM1Q9NP62 436 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 TNFRSF19Q9NS68 423 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 PTTG3PQ9NZH4 202 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 IL19Q9UHD0 177 aa13.87□□□□□ -0.19
VARS-216ENST00000428445 NDRG4Q9ULP0 352 aaKnown RBP13.87□□□□□ -0.19
VARS-216ENST00000428445 LOC100653049A0A140TA62 436 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 A8MXK9 166 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 EFCAB9A8MZ26 197 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 FAM220BPB1ANY3 271 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 CDC42EP2O14613 210 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 MRASO14807 208 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 SGCEO43556 437 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 KRT34O76011 436 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 TROVE2P10155 538 aaKnown RBP eCLIP13.86□□□□□ -0.19
VARS-216ENST00000428445 CTLA4P16410 223 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 MMP16P51512 607 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 HOXA4Q00056 320 aaPredicted RBP13.86□□□□□ -0.19
VARS-216ENST00000428445 PAX2Q02962 417 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 PRKCDQ05655 676 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 KLF10Q13118 480 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
VARS-216ENST00000428445 ESCO2Q56NI9 601 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 MESTQ5EB52 335 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 OR2T2Q6IF00 324 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 PARP8Q8N3A8 854 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 SLC25A28Q96A46 364 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 COG8Q96MW5 612 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 TMEM120AQ9BXJ8 343 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 TMEM165Q9HC07 324 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 OR5V1Q9UGF6 321 aa13.86□□□□□ -0.19
VARS-216ENST00000428445 ELOVL7A1L3X0 281 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 SLC22A2O15244 555 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 CPT2P23786 658 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 RPL4P36578 427 aaKnown RBP13.85□□□□□ -0.19
VARS-216ENST00000428445 MDH2P40926 338 aaKnown RBP13.85□□□□□ -0.19
VARS-216ENST00000428445 PDLIM3Q53GG5 364 aaPredicted RBP13.85□□□□□ -0.19
VARS-216ENST00000428445 BRD3OSQ6XYD6 125 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.85□□□□□ -0.19
VARS-216ENST00000428445 POU5F2Q8N7G0 328 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 NPEPL1Q8NDH3 523 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 C19orf18Q8NEA5 215 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 OR2T12Q8NG77 320 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 PTP4A1Q93096 173 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 RASD2Q96D21 266 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 FNDC11Q9BVV2 318 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 SSBP3Q9BWW4 388 aaPredicted RBP13.85□□□□□ -0.19
VARS-216ENST00000428445 WDR76Q9H967 626 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 SAR1AQ9NR31 198 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 ARGLU1Q9NWB6 273 aaPredicted RBP13.85□□□□□ -0.19
VARS-216ENST00000428445 GRHPRQ9UBQ7 328 aa13.85□□□□□ -0.19
VARS-216ENST00000428445 COA3Q9Y2R0 106 aaPredicted RBP13.85□□□□□ -0.19
VARS-216ENST00000428445 A0A087WUU8 490 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 TRAV40A0A0B4J280 105 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 RER1O15258 196 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 RPS2P15880 293 aaKnown RBP13.84□□□□□ -0.19
VARS-216ENST00000428445 PMELP40967 661 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 SCRN3Q0VDG4 424 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 TRAM2Q15035 370 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms