RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 C17orf100A8MU93 164 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 SSX4O60224 188 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 PPP1R3DO95685 299 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 GASTP01350 101 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 HMGN1P05114 100 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 IGFBP1P08833 259 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 RAC2P15153 192 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 HIST1H1CP16403 213 aaKnown RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 USF1P22415 310 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 GCH1P30793 250 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 CDAP32320 146 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 GZMKP49863 264 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 RIN1Q13671 783 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 KRT80Q6KB66 452 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 FBXW12Q6X9E4 464 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 IGFN1Q86VF2 1251 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 OR6V1Q8N148 313 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 LRRC18Q8N456 261 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 AQP11Q8NBQ7 271 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 OR10G2Q8NGC3 310 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 UBASH3BQ8TF42 649 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 GIPC3Q8TF64 312 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 NSMAFQ92636 917 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 RDH5Q92781 318 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 APOBEC3DQ96AK3 386 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 CLPTM1LQ96KA5 538 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 C4orf45Q96LM5 186 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 SAMD8Q96LT4 415 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 RBM4Q9BWF3 364 aaKnown RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 TEX12Q9BXU0 123 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 OPA3Q9H6K4 179 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 MARCH7Q9H992 704 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 DYNLRB1Q9NP97 96 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 HINT3Q9NQE9 182 aaKnown RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 DDX28Q9NUL7 540 aaKnown RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 GDF2Q9UK05 429 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 SONP18583 2426 aaKnown RBP7.83□□□□□ -1.16
SMC1A-203ENST00000428014 JMJD1CQ15652 2540 aa7.83□□□□□ -1.16
SMC1A-203ENST00000428014 IGHV4-30-2A0A087WSY4 118 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 A0A1W2PPL8 197 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 C5orf49A4QMS7 147 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 OR6C68A6NDL8 312 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 TRIM64A6NGJ6 449 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 TRIM64BA6NI03 449 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 SOCS2O14508 198 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 PRODHO43272 600 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 GPRIN2O60269 458 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 DOK2O60496 412 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 NDUFS7O75251 213 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 APOC1P02654 83 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 TP53P04637 393 aaPredicted RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 DAOP14920 347 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 ZNF23P17027 643 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 CR1P17927 2039 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 PCMT1P22061 227 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 APEX1P27695 318 aaKnown RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 GRK5P34947 590 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 WNT5AP41221 380 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 CRYBB2P43320 205 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 MMP15P51511 669 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 SLC3A1Q07837 685 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 ELFN2Q5R3F8 820 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 SLC27A4Q6P1M0 643 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 LEG1Q6P5S2 330 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 SHQ1Q6PI26 577 aaKnown RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 SVOPLQ8N434 492 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 ZNF525Q8N782 197 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 OR1F12Q8NHA8 337 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 KLF14Q8TD94 323 aaPredicted RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 PTP4A1Q93096 173 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 CCDC124Q96CT7 223 aaKnown RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 HAVCR1Q96D42 359 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 NMNAT3Q96T66 252 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 FEVQ99581 238 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 C1QTNF5Q9BXJ0 243 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 CADM1Q9BY67 442 aaKnown RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 PRRG3Q9BZD7 231 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 SLC22A4Q9H015 551 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 FN3KQ9H479 309 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 TOR3AQ9H497 397 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 ZNF556Q9HAH1 456 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 PLEK2Q9NYT0 353 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 ASH2LQ9UBL3 628 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 LPAR3Q9UBY5 353 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 COA3Q9Y2R0 106 aaPredicted RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 NOP16Q9Y3C1 178 aaKnown RBP7.82□□□□□ -1.16
SMC1A-203ENST00000428014 LHFPL6Q9Y693 200 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 V9GYQ6 96 aa7.82□□□□□ -1.16
SMC1A-203ENST00000428014 PLSCR5A0PG75 271 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 DCTN6O00399 190 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 SURF4O15260 269 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 FKBP6O75344 327 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 LY6G6DO95868 133 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 ABHD16AO95870 558 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 TFP02787 698 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 PATE4P0C8F1 98 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 OSMP13725 252 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 SELEP16581 610 aa7.81□□□□□ -1.16
SMC1A-203ENST00000428014 ZNF3P17036 446 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms