RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 HLA-DQA2P01906 255 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 TACR3P29371 465 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 PPICP45877 212 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 SKP1P63208 163 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 ERV3-1Q14264 604 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 DEFB110Q30KQ9 67 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 CDNFQ49AH0 187 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 SLC22A6Q4U2R8 563 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 TANGO2Q6ICL3 276 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 TMPPEQ6ZT21 453 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 MDGA2Q7Z553 956 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 HRH4Q9H3N8 390 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 SEMA6CQ9H3T2 930 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 CKLFQ9UBR5 152 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 B9D1Q9UPM9 204 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 MYO15AQ9UKN7 3530 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 FANCMQ8IYD8 2048 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 AGPAT2O15120 278 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 TGIF1Q15583 401 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.4□□□□□ -0.26
CNTN4-206ENST00000427741 SFTPA2Q8IWL1 248 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 GVQW1Q8N7I0 195 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 ACBD4Q8NC06 268 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 ADAD2Q8NCV1 583 aaKnown RBP13.4□□□□□ -0.26
CNTN4-206ENST00000427741 DMBX1Q8NFW5 382 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 ZC3H10Q96K80 434 aaKnown RBP13.4□□□□□ -0.26
CNTN4-206ENST00000427741 ZNF587Q96SQ5 575 aaPredicted RBP13.4□□□□□ -0.26
CNTN4-206ENST00000427741 PHB2Q99623 299 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 PRRT1Q99946 306 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 NUDT9Q9BW91 350 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 CLDN16Q9Y5I7 305 aa13.4□□□□□ -0.26
CNTN4-206ENST00000427741 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 NDUFS6O75380 124 aaKnown RBP13.39□□□□□ -0.27
CNTN4-206ENST00000427741 VAMP1P23763 118 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 FCARP24071 287 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 ADAM8P78325 824 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 BTG2P78543 158 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 SQSTM1Q13501 440 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 MEF2DQ14814 521 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 SLC30A7Q8NEW0 376 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 PHOSPHO1Q8TCT1 267 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 AQP3Q92482 292 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 ELSPBP1Q96BH3 223 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
CNTN4-206ENST00000427741 SLC25A44Q96H78 314 aaPredicted RBP13.39□□□□□ -0.27
CNTN4-206ENST00000427741 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 FAM60AQ9NP50 221 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 MRPL22Q9NWU5 206 aaKnown RBP13.39□□□□□ -0.27
CNTN4-206ENST00000427741 C2orf74A8MZ97 194 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 FSTP19883 344 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 GDI1P31150 447 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 CENPAP49450 140 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 SEC13P55735 322 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 SPOCK1Q08629 439 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 RNASE10Q5GAN6 216 aaKnown RBP13.39□□□□□ -0.27
CNTN4-206ENST00000427741 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 FAM109BQ6ICB4 259 aaPredicted RBP13.39□□□□□ -0.27
CNTN4-206ENST00000427741 OR52W1Q6IF63 320 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 TAF8Q7Z7C8 310 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 FJX1Q86VR8 437 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 TMEM200AQ86VY9 491 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 ARHGEF39Q8N4T4 335 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 OR4K17Q8NGC6 315 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 NUBPLQ8TB37 319 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 ELP5Q8TE02 316 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 ARL11Q969Q4 196 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 C8orf44Q96CB5 159 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 CCDC3Q9BQI4 270 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 OR10A5Q9H207 317 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 CYTL1Q9NRR1 136 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 CSAG2Q9Y5P2 127 aa13.39□□□□□ -0.27
CNTN4-206ENST00000427741 REV3LO60673 3130 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 A0A0A6YYC8 382 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 A0A0A6YYH2 397 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 TEX13DA0A0J9YY54 714 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 A6NJ64 397 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 I3L1I5 382 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 CRHP06850 196 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 SPARCP09486 303 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 TPT1P13693 172 aaKnown RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 ROM1Q03395 351 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 MED25Q71SY5 747 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 CATSPERDQ86XM0 798 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 JAGN1Q8N5M9 183 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 ZNF296Q8WUU4 475 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 ASB17Q8WXJ9 295 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 RRNAD1Q96FB5 475 aaKnown RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 BCL2L14Q9BZR8 327 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 FN3KRPQ9HA64 309 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 ACKR4Q9NPB9 350 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 ARHGEF17Q96PE2 2063 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 A0A0J9YY10 115 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 SNAPINO95295 136 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 CD2P06729 351 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 ERCC1P07992 297 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 CCL5P13501 91 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 PSMB6P28072 239 aa13.38□□□□□ -0.27
CNTN4-206ENST00000427741 HABP2Q14520 560 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-206ENST00000427741 NFATC4Q14934 902 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms