RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 HOXB13Q92826 284 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 CMBLQ96DG6 245 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 GPX7Q96SL4 187 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 C12orf57Q99622 126 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 PCED1AQ9H1Q7 454 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 TAS2R4Q9NYW5 299 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 GPN3Q9UHW5 284 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 R4GN57 208 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 F5H0A9 414 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 H7C2Y5 167 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 SLC17A2O00624 439 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 FADS1O60427 444 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 LMX1BO60663 402 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 MTRF1O75570 445 aaKnown RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 ACTL6AO96019 429 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 PSMD4P55036 377 aaKnown RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 TAS2R19P59542 299 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 HNRNPKP61978 463 aaKnown RBP eCLIP12.88□□□□□ -0.355e-7■■■□□ 16.1
MSH5-206ENST00000423982 METTL27Q8N6F8 245 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 C16orf52Q8NHV5 167 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 C2CD4CQ8TF44 421 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 CASTOR1Q8WTX7 329 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 RBM18Q96H35 190 aaKnown RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 USB1Q9BQ65 265 aaKnown RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 PCOLCE2Q9UKZ9 415 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 TMED7Q9Y3B3 224 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 KLF2Q9Y5W3 355 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 MAOAP21397 527 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 OR52W1Q6IF63 320 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 TCEAL6Q6IPX3 200 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 TMEM71Q6P5X7 295 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 GVQW1Q8N7I0 195 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 ACBD4Q8NC06 268 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 CCDC107Q8WV48 283 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 TCEAL3Q969E4 200 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 MRGPRFQ96AM1 343 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 ZC3H10Q96K80 434 aaKnown RBP12.87□□□□□ -0.35
MSH5-206ENST00000423982 INTS14Q96SY0 518 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 CMKLR1Q99788 373 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 POTEKPQ9BYX7 375 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 CST11Q9H112 138 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 ALX4Q9H161 411 aaPredicted RBP12.87□□□□□ -0.35
MSH5-206ENST00000423982 TMEM218A2RU14 115 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 EFCAB7A8K855 629 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 EEF1E1-BLOC1S5C9J1V9 151 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 PIAS2O75928 621 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
MSH5-206ENST00000423982 AGTR1P30556 359 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 CASRP41180 1078 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 SPOCK1Q08629 439 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 PPP1R1AQ13522 171 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 ISXQ2M1V0 245 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 PLEKHN1Q494U1 663 aaPredicted RBP12.87□□□□□ -0.35
MSH5-206ENST00000423982 PAN3Q58A45 887 aaKnown RBP12.87□□□□□ -0.35
MSH5-206ENST00000423982 RAB12Q6IQ22 244 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 HAGHLQ6PII5 290 aaPredicted RBP12.87□□□□□ -0.35
MSH5-206ENST00000423982 TMPPEQ6ZT21 453 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 KCTD9Q7L273 389 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 ZFP82Q8N141 532 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 PHOSPHO1Q8TCT1 267 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 PAQR8Q8TEZ7 354 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 PMM1Q92871 262 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 ZBTB8AQ96BR9 441 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 HRASLS2Q9NWW9 162 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 B9D1Q9UPM9 204 aa12.87□□□□□ -0.35
MSH5-206ENST00000423982 TMEM131Q92545 1883 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 WIPF3A6NGB9 483 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 ZNF736B4DX44 427 aaPredicted RBP12.86□□□□□ -0.35
MSH5-206ENST00000423982 SULT2B1O00204 365 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 ACTBP60709 375 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 ACTG1P63261 375 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 PRAMEF17Q5VTA0 474 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 TMEM225Q6GV28 225 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 FAM166AQ6J272 317 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 ATG4DQ86TL0 474 aaPredicted RBP12.86□□□□□ -0.35
MSH5-206ENST00000423982 SLC25A45Q8N413 288 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 BAHD1Q8TBE0 780 aaPredicted RBP12.86□□□□□ -0.35
MSH5-206ENST00000423982 TAAR8Q969N4 342 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 SLC41A2Q96JW4 573 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 CCDC3Q9BQI4 270 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 Q9N2J8 555 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 MBD2Q9UBB5 411 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 PILRBQ9UKJ0 227 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 ASPMQ8IZT6 3477 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 TMEM127O75204 238 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 CYB5AP00167 134 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 ASAH2BP0C7U1 165 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 SP9P0CG40 484 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 HOXA6P31267 233 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 SKP1P63208 163 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 GKN2Q86XP6 184 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 RTN4RQ9BZR6 473 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 TLNRD1Q9H1K6 362 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms