RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TUBG2Q9NRH3 451 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 TBCCD1Q9NVR7 557 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 KLHL21Q9UJP4 597 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 PPP1R3CQ9UQK1 317 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 ADAM18Q9Y3Q7 739 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 SERPINA1P01009 418 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 CD14P08571 375 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 EGR1P18146 543 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 ZFP36P26651 326 aaKnown RBP13.62□□□□□ -0.23
COL18A1-205ENST00000423214 GNGT1P63211 74 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 HNRNPA0Q13151 305 aaKnown RBP13.62□□□□□ -0.23
COL18A1-205ENST00000423214 KRR1Q13601 381 aaKnown RBP13.62□□□□□ -0.23
COL18A1-205ENST00000423214 IFI44LQ53G44 452 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 ESCO2Q56NI9 601 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 MESTQ5EB52 335 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 C1orf94Q6P1W5 598 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 HACD2Q6Y1H2 254 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 FKBP9P1Q75LS8 142 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 VASH1Q7L8A9 365 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-205ENST00000423214 RNF113BQ8IZP6 322 aaKnown RBP13.62□□□□□ -0.23
COL18A1-205ENST00000423214 ZNF283Q8N7M2 679 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 SIGLECL1Q8N7X8 197 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 ITLN1Q8WWA0 313 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 Q96M85 177 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 KCTD14Q9BQ13 255 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-205ENST00000423214 NSRP1Q9H0G5 558 aaKnown RBP13.62□□□□□ -0.23
COL18A1-205ENST00000423214 RERGLQ9H628 205 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 OR5V1Q9UGF6 321 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 IL19Q9UHD0 177 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 EGFL7Q9UHF1 273 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 NUP50Q9UKX7 468 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 TMEM5Q9Y2B1 443 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 POLR1DQ9Y2S0 133 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 AUP1Q9Y679 476 aa13.62□□□□□ -0.23
COL18A1-205ENST00000423214 TEX13CA0A0J9YWL9 993 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 AHCYL1O43865 530 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 SCG5P05408 212 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 KITLGP21583 273 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 FOXL1Q12952 345 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 ZNF154Q13106 437 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 ZBED5Q49AG3 693 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 Q6ZR03 302 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 MBOAT2Q6ZWT7 520 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 CBLL1Q75N03 491 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 CYP4Z1Q86W10 505 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 MUC20Q8N307 709 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-205ENST00000423214 RNF148Q8N7C7 305 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 FAM156AQ8NDB6 213 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 DEFB108BQ8NET1 73 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 DVL3Q92997 716 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-205ENST00000423214 FAM162AQ96A26 154 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 CMBLQ96DG6 245 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 OR2V2Q96R30 315 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 GPA33Q99795 319 aa13.61□□□□□ -0.23
COL18A1-205ENST00000423214 ZMAT3Q9HA38 289 aaKnown RBP13.61□□□□□ -0.23
COL18A1-205ENST00000423214 A0A087WUU8 490 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 PRSS37A4D1T9 235 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 DNAJC9-AS1A6NH13 148 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 A8MXK9 166 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 CDC42EP2O14613 210 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 FFAR1O14842 300 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 CTLA4P16410 223 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 ZNF12P17014 697 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 MDH2P40926 338 aaKnown RBP13.6□□□□□ -0.23
COL18A1-205ENST00000423214 SEC61A1P61619 476 aaKnown RBP13.6□□□□□ -0.23
COL18A1-205ENST00000423214 FHL1Q13642 323 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 ZMYND11Q15326 602 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 OR5AS1Q8N127 324 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 RASD2Q96D21 266 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 HSH2DQ96JZ2 352 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 MMP26Q9NRE1 261 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 ADA2Q9NZK5 511 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 ABCD2Q9UBJ2 740 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 ASH2LQ9UBL3 628 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 LRCH1Q9Y2L9 728 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 POLR3KQ9Y2Y1 108 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-205ENST00000423214 STARD10Q9Y365 291 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 PCDHGB1Q9Y5G3 927 aa13.6□□□□□ -0.23
COL18A1-205ENST00000423214 F5H0A9 414 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-205ENST00000423214 J3QW42 95 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 IFNL4K9M1U5 179 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 SLC16A7O60669 478 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 NDUFB2O95178 105 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 HKR1P10072 659 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 PRDX6P30041 224 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 SDHAP31040 664 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 SLC6A9P48067 706 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 RGS6P49758 472 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 MMP16P51512 607 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 FGD3Q5JSP0 725 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 GLYATQ6IB77 296 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 TBPL2Q6SJ96 375 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 TMPRSS11FQ6ZWK6 438 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 DOK3Q7L591 496 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 FAM122BQ7Z309 247 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 LRRC28Q86X40 367 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-205ENST00000423214 GLB1L2Q8IW92 636 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 ATG16L2Q8NAA4 619 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 SLC7A6Q92536 515 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 HAVCR1Q96D42 359 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms