RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZNF620Q6ZNG0 422 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 NPEPL1Q8NDH3 523 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 IPCEF1Q8WWN9 437 aaPredicted RBP13.08□□□□□ -0.32
NUP50-204ENST00000417702 TSSK2Q96PF2 358 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 NMNAT3Q96T66 252 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 CADM1Q9BY67 442 aaKnown RBP13.08□□□□□ -0.32
NUP50-204ENST00000417702 SHARPINQ9H0F6 387 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 SRA1Q9HD15 236 aaKnown RBP13.08□□□□□ -0.32
NUP50-204ENST00000417702 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 ZNF275Q9NSD4 429 aaPredicted RBP13.08□□□□□ -0.32
NUP50-204ENST00000417702 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 B9D1Q9UPM9 204 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 GRIP1Q9Y3R0 1128 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 AQP12BA6NM10 295 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 KIAA1324LA8MWY0 1029 aaPredicted RBP13.07□□□□□ -0.32
NUP50-204ENST00000417702 ACOT8O14734 319 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 PPIHO43447 177 aaKnown RBP13.07□□□□□ -0.32
NUP50-204ENST00000417702 CDC14BO60729 498 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 TRIP10Q15642 601 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 ZMAT1Q5H9K5 638 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 OTPQ5XKR4 325 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 CCDC121Q6ZUS5 278 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.07□□□□□ -0.32
NUP50-204ENST00000417702 AQP12AQ8IXF9 295 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 OR6V1Q8N148 313 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 OR9Q2Q8NGE9 314 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 OR1F12Q8NHA8 337 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 YIPF5Q969M3 257 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 COG8Q96MW5 612 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 RACGAP1Q9H0H5 632 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 MMADHCQ9H3L0 296 aaPredicted RBP13.07□□□□□ -0.32
NUP50-204ENST00000417702 REEP1Q9H902 201 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
NUP50-204ENST00000417702 CGGBP1Q9UFW8 167 aaPredicted RBP13.07□□□□□ -0.32
NUP50-204ENST00000417702 SAMHD1Q9Y3Z3 626 aaKnown RBP13.07□□□□□ -0.32
NUP50-204ENST00000417702 CDH10Q9Y6N8 788 aa13.07□□□□□ -0.32
NUP50-204ENST00000417702 IGLV1-36A0A0B4J1U3 117 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 DCTN6O00399 190 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 EBAG9O00559 213 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 RER1O15258 196 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 SPRY3O43610 288 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 TIMM8AO60220 97 aaPredicted RBP13.06□□□□□ -0.32
NUP50-204ENST00000417702 FAM157CP0CG43 387 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 MMP15P51511 669 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 FLOT2Q14254 428 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
NUP50-204ENST00000417702 SLC36A3Q495N2 470 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 CCDC92Q53HC0 331 aaPredicted RBP13.06□□□□□ -0.32
NUP50-204ENST00000417702 FAM209AQ5JX71 171 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 SLC35F1Q5T1Q4 408 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 OR2T5Q6IEZ7 315 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 LINC01356Q8N9X3 169 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 GJC3Q8NFK1 279 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 OR4C15Q8NGM1 316 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 OR2T29Q8NH02 315 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 GTF3AQ92664 365 aaKnown RBP13.06□□□□□ -0.32
NUP50-204ENST00000417702 DCLRE1CQ96SD1 692 aaKnown RBP13.06□□□□□ -0.32
NUP50-204ENST00000417702 EGLN3Q9H6Z9 239 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 SAP30LQ9HAJ7 183 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 ATPIF1Q9UII2 106 aa13.06□□□□□ -0.32
NUP50-204ENST00000417702 ATRQ13535 2644 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 IGHV1-69-2A0A0G2JMI3 117 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 OR6C6A6NF89 314 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 RP2O75695 350 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 GPANK1O95872 356 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 GASTP01350 101 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 HLA-DQA2P01906 255 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 RAP2AP10114 183 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 GAAP10253 952 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 HOXB6P17509 224 aaKnown RBP13.05□□□□□ -0.32
NUP50-204ENST00000417702 HNF1AP20823 631 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 IGFBP5P24593 272 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 IL2RGP31785 369 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 CRYBB2P43320 205 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 RGS6P49758 472 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.05□□□□□ -0.32
NUP50-204ENST00000417702 CCNIQ14094 377 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 MEP1BQ16820 701 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 ZNF770Q6IQ21 691 aaPredicted RBP13.05□□□□□ -0.32
NUP50-204ENST00000417702 RASSF6Q6ZTQ3 369 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 USP51Q70EK9 711 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 ZBTB46Q86UZ6 589 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 AQP11Q8NBQ7 271 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 SDR9C7Q8NEX9 313 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 ELMOD3Q96FG2 381 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 SOX7Q9BT81 388 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 CDADC1Q9BWV3 514 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 EGLN1Q9GZT9 426 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 HDHD2Q9H0R4 259 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 ZDHHC8Q9ULC8 765 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 POMPQ9Y244 141 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 U3KQV3 271 aa13.05□□□□□ -0.32
NUP50-204ENST00000417702 OR6C68A6NDL8 312 aa13.04□□□□□ -0.32
NUP50-204ENST00000417702 ZSCAN5BA6NJL1 495 aa13.04□□□□□ -0.32
NUP50-204ENST00000417702 J3QW42 95 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms