RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CTLA4P16410 223 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 ZNF12P17014 697 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 ZNF26P17031 533 aaPredicted RBP12.16□□□□□ -0.46
PAF1-202ENST00000416728 RBMXP38159 391 aaKnown RBP12.16□□□□□ -0.46
PAF1-202ENST00000416728 SLC6A9P48067 706 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 LIPEQ05469 1076 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 ZNF154Q13106 437 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 ZMYND11Q15326 602 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 CGB2Q6NT52 195 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 FAM122BQ7Z309 247 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 CYP4Z1Q86W10 505 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 LRRC28Q86X40 367 aaPredicted RBP12.16□□□□□ -0.46
PAF1-202ENST00000416728 SLC15A3Q8IY34 581 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 POU5F2Q8N7G0 328 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 SLC7A6Q92536 515 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 OR2V2Q96R30 315 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 MRI1Q9BV20 369 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 ANKRD19PQ9H560 264 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 RERGLQ9H628 205 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 ARMCX1Q9P291 453 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 ASH2LQ9UBL3 628 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 NUP50Q9UKX7 468 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 TMEM5Q9Y2B1 443 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 WNK2Q9Y3S1 2297 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 A8MXK9 166 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 TRAPPC2LH3BP13 241 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 SLC16A7O60669 478 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 KHDRBS3O75525 346 aaKnown RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 RAC2P15153 192 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 H2AFXP16104 143 aaPredicted RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 MDH2P40926 338 aaKnown RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 SEC61A1P61619 476 aaKnown RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 LSM6P62312 80 aaKnown RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 KRR1Q13601 381 aaKnown RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 ESCO2Q56NI9 601 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 GPR139Q6DWJ6 353 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 CBLL1Q75N03 491 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 DOK3Q7L591 496 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 GLB1L2Q8IW92 636 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 RP9Q8TA86 221 aaKnown RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 PTP4A1Q93096 173 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 RASD2Q96D21 266 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 HSH2DQ96JZ2 352 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 SIGLEC11Q96RL6 698 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 GPA33Q99795 319 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 SYT4Q9H2B2 425 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 NMNAT1Q9HAN9 279 aaPredicted RBP12.15□□□□□ -0.46
PAF1-202ENST00000416728 OR5V1Q9UGF6 321 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 INSIG2Q9Y5U4 225 aa12.15□□□□□ -0.46
PAF1-202ENST00000416728 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 OR6C6A6NF89 314 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 F5H0A9 414 aaPredicted RBP12.14□□□□□ -0.47
PAF1-202ENST00000416728 J3QW42 95 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 SASH3O75995 380 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 NDUFB2O95178 105 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 SERPINA1P01009 418 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 HKR1P10072 659 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 PRTN3P24158 256 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 SDHAP31040 664 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 RGS6P49758 472 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 ERFP50548 548 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 MMP16P51512 607 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 FOXL1Q12952 345 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 OTPQ5XKR4 325 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 SLC27A4Q6P1M0 643 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 OR5AS1Q8N127 324 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 MUC20Q8N307 709 aaPredicted RBP12.14□□□□□ -0.47
PAF1-202ENST00000416728 ATG16L2Q8NAA4 619 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 OR1F12Q8NHA8 337 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 SLC7A13Q8TCU3 470 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 FAM46AQ96IP4 442 aaKnown RBP12.14□□□□□ -0.47
PAF1-202ENST00000416728 ZNF69Q9UC07 566 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 ATPIF1Q9UII2 106 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
PAF1-202ENST00000416728 POLR1DQ9Y2S0 133 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 ENPP4Q9Y6X5 453 aa12.14□□□□□ -0.47
PAF1-202ENST00000416728 DYSFO75923 2080 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 IFNL4K9M1U5 179 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 NME4O00746 187 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 SOCS2O14508 198 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 WIPF1O43516 503 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 SLC7A2P52569 658 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 TUSC1Q2TAM9 212 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
PAF1-202ENST00000416728 FGD3Q5JSP0 725 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 KLF17Q5JT82 389 aaPredicted RBP12.13□□□□□ -0.47
PAF1-202ENST00000416728 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 OR10AD1Q8NGE0 317 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 OR5L1Q8NGL2 311 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 FAM162AQ96A26 154 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 DUX5Q96PT3 197 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 ZNF747Q9BV97 191 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms