RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PYURFQ96I23 114 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 FUZQ9BT04 418 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 FAM107BQ9H098 131 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 G6PC2Q9NQR9 355 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 IL20RAQ9UHF4 553 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 PURGQ9UJV8 347 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 SVEP1Q4LDE5 3571 aa14.91□□□□□ -0.02
PDLIM2-208ENST00000416159 FBN3Q75N90 2809 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 J3QW42 95 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 HSD17B1P14061 328 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 TNFSF4P23510 183 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 CRABP1P29762 137 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 CDKN2AP42771 156 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 FXYD6P3P58550 94 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 KCNMB1Q16558 191 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 PGM2L1Q6PCE3 622 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 DNM1P34Q6PK57 102 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 PTCHD4Q6ZW05 846 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 CPLX4Q7Z7G2 160 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 FAM86B1Q8N7N1 296 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 OR1F12Q8NHA8 337 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 HAVCR1Q96D42 359 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 DCLRE1CQ96SD1 692 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 GAL3ST1Q99999 423 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 NUAK2Q9H093 628 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 ASH2LQ9UBL3 628 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 ATPIF1Q9UII2 106 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 MAGEL2Q9UJ55 1249 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 STARD10Q9Y365 291 aa14.9□□□□□ -0.02
PDLIM2-208ENST00000416159 A0A0G2JMP0 313 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 A0A0X1KG70 313 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 J3QLI3 93 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 IMPA2O14732 288 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 GADD45GO95257 159 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 TNFRSF1AP19438 455 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 RGS6P49758 472 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 CCDC92Q53HC0 331 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 OR4M2Q8NGB6 313 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 MCUR1Q96AQ8 359 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 SAMD8Q96LT4 415 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 GPA33Q99795 319 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 POFUT1Q9H488 388 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 POLR1DQ9Y2S0 133 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 NPTNQ9Y639 398 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 DYSFO75923 2080 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 TANC2Q9HCD6 1990 aa14.89□□□□□ -0.03
PDLIM2-208ENST00000416159 ISPDA4D126 451 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 OR6C6A6NF89 314 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 SURF4O15260 269 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 SEMG1P04279 462 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 SLC6A6P31641 620 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 CENPAP49450 140 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 SPIBQ01892 262 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 RFX4Q33E94 735 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 SPRNQ5BIV9 151 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 SAMD4BQ5PRF9 694 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 DCAF12L2Q5VW00 463 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 C1orf94Q6P1W5 598 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 PGAM4Q8N0Y7 254 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 GJC3Q8NFK1 279 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 OR5L1Q8NGL2 311 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 ZNF418Q8TF45 676 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 SLC7A6Q92536 515 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 NSMCE2Q96MF7 247 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 ERMAPQ96PL5 475 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 TMEM106BQ9NUM4 274 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 B9D1Q9UPM9 204 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 V9GYQ6 96 aa14.88□□□□□ -0.03
PDLIM2-208ENST00000416159 ARPC3O15145 178 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 RER1O15258 196 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 PPP1R3DO95685 299 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 RENP00797 406 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 RAC2P15153 192 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 GATA3P23771 443 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 IFNGR2P38484 337 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 HIST1H3AP68431 136 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 HIST2H3PS2Q5TEC6 136 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 OTPQ5XKR4 325 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 Q6ZR03 302 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 C1orf229Q6ZS94 237 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 HIST2H3AQ71DI3 136 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 JAZF1Q86VZ6 243 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 OR2Z1Q8NG97 314 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 FANK1Q8TC84 345 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 ST7LQ8TDW4 575 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 ZFAND2BQ8WV99 257 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 CDRT15Q96T59 188 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 TMPRSS13Q9BYE2 586 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 OR52D1Q9H346 318 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 UBAP1Q9NZ09 502 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 CD300AQ9UGN4 299 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 IL19Q9UHD0 177 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 TAGLN3Q9UI15 199 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 ARHGAP32A7KAX9 2087 aa14.87□□□□□ -0.03
PDLIM2-208ENST00000416159 OR10H3O60404 316 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 VENTXO95231 258 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 AVPP01185 164 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 IGHV2-70P01814 119 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 FABP3P05413 133 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 SBK2P0C263 348 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms