RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 C1orf94Q6P1W5 598 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 CBLL1Q75N03 491 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 TPD52L3Q96J77 140 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 PRRC1Q96M27 445 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 CCT8L2Q96SF2 557 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 NDEL1Q9GZM8 345 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 TUBG2Q9NRH3 451 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 IL19Q9UHD0 177 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 RPS6KA6Q9UK32 745 aa13.13□□□□□ -0.31
SBDSP1-201ENST00000415772 TRAPPC2LH3BP13 241 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 GPANK1O95872 356 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 IFNW1P05000 195 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 RNASE1P07998 156 aaKnown RBP13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 RPS2P15880 293 aaKnown RBP13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 OR1E2P47887 323 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 GNB2P62879 340 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 KRT72Q14CN4 511 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 SPATC1Q76KD6 591 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 SYT9Q86SS6 491 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 IGFN1Q86VF2 1251 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 LRRC28Q86X40 367 aaPredicted RBP13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 PGAM4Q8N0Y7 254 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 PARP8Q8N3A8 854 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 ZNF283Q8N7M2 679 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 ITLN1Q8WWA0 313 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 LIPHQ8WWY8 451 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 ZDHHC16Q969W1 377 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 BPIFA2Q96DR5 249 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 PLEKHA8Q96JA3 519 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 WACQ9BTA9 647 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 DCAF16Q9NXF7 216 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 IL20RAQ9UHF4 553 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 HIF3AQ9Y2N7 669 aa13.12□□□□□ -0.31
SBDSP1-201ENST00000415772 MEGF8Q7Z7M0 2845 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 IGHV3OR16-10A0A075B7F0 116 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 XKRYO14609 159 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 SGCEO43556 437 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 PIP5K1CO60331 668 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 CRYBA1P05813 215 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 HSD17B1P14061 328 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 RPL4P36578 427 aaKnown RBP13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 SEC61A1P61619 476 aaKnown RBP13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 ZMYND11Q15326 602 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 PDLIM3Q53GG5 364 aaPredicted RBP13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 SPRNQ5BIV9 151 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 TMEM255AQ5JRV8 349 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 SLC27A4Q6P1M0 643 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 C16orf89Q6UX73 402 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 LRRN1Q6UXK5 716 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 OAFQ86UD1 273 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 FAM162AQ96A26 154 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 CMBLQ96DG6 245 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 OR2V2Q96R30 315 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 SSBP3Q9BWW4 388 aaPredicted RBP13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 GORASP2Q9H8Y8 452 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 TBCCD1Q9NVR7 557 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 FAM53CQ9NYF3 392 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 ADA2Q9NZK5 511 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 GRHPRQ9UBQ7 328 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 POLR3KQ9Y2Y1 108 aaPredicted RBP13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 TANC2Q9HCD6 1990 aa13.11□□□□□ -0.31
SBDSP1-201ENST00000415772 A8MXK9 166 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 ICMTO60725 284 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 COX5BP10606 129 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 MIDNQ504T8 468 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 KLF17Q5JT82 389 aaPredicted RBP13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 SAMD4BQ5PRF9 694 aaKnown RBP13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 GLYATQ6IB77 296 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 C17orf107Q6ZR85 190 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 FKBP9P1Q75LS8 142 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 RRM2BQ7LG56 351 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 NLRC3Q7RTR2 1065 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 RNF113BQ8IZP6 322 aaKnown RBP13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 OFCC1Q8IZS5 231 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 OR5AS1Q8N127 324 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 OR5L1Q8NGL2 311 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 OR51A7Q8NH64 312 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 ANKRD19PQ9H560 264 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 RERGLQ9H628 205 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 EMC7Q9NPA0 242 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 POLE4Q9NR33 117 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 MIOXQ9UGB7 285 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 A4GNTQ9UNA3 340 aa13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 SAMD4AQ9UPU9 718 aaKnown RBP13.1□□□□□ -0.31
SBDSP1-201ENST00000415772 TRAV27A0A087WT01 109 aa13.09□□□□□ -0.31
SBDSP1-201ENST00000415772 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
SBDSP1-201ENST00000415772 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
SBDSP1-201ENST00000415772 CEACAM18A8MTB9 384 aa13.09□□□□□ -0.31
SBDSP1-201ENST00000415772 EFCAB9A8MZ26 197 aa13.09□□□□□ -0.31
SBDSP1-201ENST00000415772 H7C1C5 153 aa13.09□□□□□ -0.31
SBDSP1-201ENST00000415772 ZNF682O95780 498 aa13.09□□□□□ -0.31
SBDSP1-201ENST00000415772 SERPINA1P01009 418 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms