RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZC3H10Q96K80 434 aaKnown RBP8.79□□□□□ -1
CD44-206ENST00000415148 MICU1Q9BPX6 476 aa8.79□□□□□ -1
CD44-206ENST00000415148 ABHD6Q9BV23 337 aa8.79□□□□□ -1
CD44-206ENST00000415148 PDE7BQ9NP56 450 aa8.79□□□□□ -1
CD44-206ENST00000415148 RASL12Q9NYN1 266 aa8.79□□□□□ -1
CD44-206ENST00000415148 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 MMP17Q9ULZ9 603 aa8.79□□□□□ -1
CD44-206ENST00000415148 MRPS18BQ9Y676 258 aaKnown RBP8.79□□□□□ -1
CD44-206ENST00000415148 R4GMQ9 66 aa8.79□□□□□ -1
CD44-206ENST00000415148 IGKV3D-11A0A0A0MRZ8 115 aa8.78□□□□□ -1
CD44-206ENST00000415148 OR5H14A6NHG9 310 aa8.78□□□□□ -1
CD44-206ENST00000415148 OR2T1O43869 369 aa8.78□□□□□ -1
CD44-206ENST00000415148 F12P00748 615 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 AMY2AP04746 511 aa8.78□□□□□ -1
CD44-206ENST00000415148 CSN2P05814 226 aa8.78□□□□□ -1
CD44-206ENST00000415148 ADCYAP1P18509 176 aa8.78□□□□□ -1
CD44-206ENST00000415148 ARRB1P49407 418 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 PNLIPRP2P54317 469 aa8.78□□□□□ -1
CD44-206ENST00000415148 CTAG1AP78358 180 aa8.78□□□□□ -1
CD44-206ENST00000415148 SRSF3P84103 164 aaKnown RBP8.78□□□□□ -1
CD44-206ENST00000415148 MC2RQ01718 297 aa8.78□□□□□ -1
CD44-206ENST00000415148 GLO1Q04760 184 aa8.78□□□□□ -1
CD44-206ENST00000415148 MOGAT2Q3SYC2 334 aa8.78□□□□□ -1
CD44-206ENST00000415148 JMJD6Q6NYC1 403 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 MDGA2Q7Z553 956 aa8.78□□□□□ -1
CD44-206ENST00000415148 BPIFB2Q8N4F0 458 aa8.78□□□□□ -1
CD44-206ENST00000415148 SLC25A44Q96H78 314 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 PRRT1Q99946 306 aa8.78□□□□□ -1
CD44-206ENST00000415148 PCDHB16Q9NRJ7 776 aa8.78□□□□□ -1
CD44-206ENST00000415148 TAS2R4Q9NYW5 299 aa8.78□□□□□ -1
CD44-206ENST00000415148 COMMD9Q9P000 198 aa8.78□□□□□ -1
CD44-206ENST00000415148 RAB22AQ9UL26 194 aa8.78□□□□□ -1
CD44-206ENST00000415148 TNFSF18Q9UNG2 199 aa8.78□□□□□ -1
CD44-206ENST00000415148 LRP12Q9Y561 859 aa8.78□□□□□ -1
CD44-206ENST00000415148 PIAS3Q9Y6X2 628 aa8.78□□□□□ -1
CD44-206ENST00000415148 LOC100509620A0A075B734 347 aa8.78□□□□□ -1
CD44-206ENST00000415148 TMED7-TICAM2A0A0A6YYA0 188 aa8.78□□□□□ -1
CD44-206ENST00000415148 KANTRA0A1W2PQU2 76 aa8.78□□□□□ -1
CD44-206ENST00000415148 METTL21EPA6NDL7 271 aa8.78□□□□□ -1
CD44-206ENST00000415148 LINC01387J3KSC0 135 aa8.78□□□□□ -1
CD44-206ENST00000415148 PLPP3O14495 311 aa8.78□□□□□ -1
CD44-206ENST00000415148 DDAH2O95865 285 aa8.78□□□□□ -1
CD44-206ENST00000415148 ZNF28P17035 718 aa8.78□□□□□ -1
CD44-206ENST00000415148 DNASE1L1P49184 302 aa8.78□□□□□ -1
CD44-206ENST00000415148 MFGE8Q08431 387 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 PMPCAQ10713 525 aa8.78□□□□□ -1
CD44-206ENST00000415148 ELAVL1Q15717 326 aaKnown RBP8.78□□□□□ -1
CD44-206ENST00000415148 TOMM34Q15785 309 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 GUCA2BQ16661 112 aa8.78□□□□□ -1
CD44-206ENST00000415148 PDSS1Q5T2R2 415 aa8.78□□□□□ -1
CD44-206ENST00000415148 ATPAF1Q5TC12 328 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 TMEM244Q5VVB8 128 aa8.78□□□□□ -1
CD44-206ENST00000415148 C11orf87Q6NUJ2 197 aa8.78□□□□□ -1
CD44-206ENST00000415148 FAHD2BQ6P2I3 314 aaPredicted RBP8.78□□□□□ -1
CD44-206ENST00000415148 MOB3CQ70IA8 216 aa8.78□□□□□ -1
CD44-206ENST00000415148 LYPD6Q86Y78 171 aa8.78□□□□□ -1
CD44-206ENST00000415148 C7orf61Q8IZ16 206 aa8.78□□□□□ -1
CD44-206ENST00000415148 ZDHHC22Q8N966 263 aa8.78□□□□□ -1
CD44-206ENST00000415148 OR4S1Q8NGB4 309 aa8.78□□□□□ -1
CD44-206ENST00000415148 SLC25A36Q96CQ1 311 aa8.78□□□□□ -1
CD44-206ENST00000415148 MRPL38Q96DV4 380 aaKnown RBP8.78□□□□□ -1
CD44-206ENST00000415148 MVB12AQ96EY5 273 aa8.78□□□□□ -1
CD44-206ENST00000415148 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
CD44-206ENST00000415148 FAHD2AQ96GK7 314 aa8.78□□□□□ -1
CD44-206ENST00000415148 NARS2Q96I59 477 aaKnown RBP8.78□□□□□ -1
CD44-206ENST00000415148 LRRC61Q9BV99 259 aa8.78□□□□□ -1
CD44-206ENST00000415148 RTN4RQ9BZR6 473 aa8.78□□□□□ -1
CD44-206ENST00000415148 OR8D2Q9GZM6 311 aa8.78□□□□□ -1
CD44-206ENST00000415148 RAB33BQ9H082 229 aa8.78□□□□□ -1
CD44-206ENST00000415148 HPF1Q9NWY4 346 aa8.78□□□□□ -1
CD44-206ENST00000415148 TAS2R3Q9NYW6 316 aa8.78□□□□□ -1
CD44-206ENST00000415148 MSRAQ9UJ68 235 aa8.78□□□□□ -1
CD44-206ENST00000415148 TMED7Q9Y3B3 224 aa8.78□□□□□ -1
CD44-206ENST00000415148 F5P12259 2224 aa8.77□□□□□ -1
CD44-206ENST00000415148 KIAA0100Q14667 2235 aaKnown RBP8.77□□□□□ -1
CD44-206ENST00000415148 RNF222A6NCQ9 220 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 WIPF3A6NGB9 483 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 TLCD2A6NGC4 264 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 A6NIZ1 184 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 SCGNO76038 276 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 PLGP00747 810 aaPredicted RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 CD34P28906 385 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 RPL35P42766 123 aaKnown RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 GSK3AP49840 483 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 ATP1B3P54709 279 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 RAP1BP61224 184 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 RAP1AP62834 184 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 ZP4Q12836 540 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 DHRS2Q13268 280 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 PCK2Q16822 640 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 SLC22A6Q4U2R8 563 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 VWA2Q5GFL6 755 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 PABPC1L2AQ5JQF8 200 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 C1orf140Q5VVS0 124 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 C1QL3Q5VWW1 255 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 HLA-DQA1Q5Y7H0 255 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 DNM1P34Q6PK57 102 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 OR2W3Q7Z3T1 314 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 GRINAQ7Z429 371 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 MARCH3Q86UD3 253 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms