RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 C1orf100Q5SVJ3 147 aa8.81□□□□□ -1
SS18-203ENST00000415083 ZNF813Q6ZN06 617 aa8.81□□□□□ -1
SS18-203ENST00000415083 HSD17B13Q7Z5P4 300 aaPredicted RBP8.81□□□□□ -1
SS18-203ENST00000415083 ZNF454Q8N9F8 522 aa8.81□□□□□ -1
SS18-203ENST00000415083 STEAP2Q8NFT2 490 aa8.81□□□□□ -1
SS18-203ENST00000415083 OR5M8Q8NGP6 311 aa8.81□□□□□ -1
SS18-203ENST00000415083 OR52N5Q8NH56 324 aa8.81□□□□□ -1
SS18-203ENST00000415083 OR1L3Q8NH93 324 aa8.81□□□□□ -1
SS18-203ENST00000415083 FAM117AQ9C073 453 aa8.81□□□□□ -1
SS18-203ENST00000415083 WWTR1Q9GZV5 400 aa8.81□□□□□ -1
SS18-203ENST00000415083 CST11Q9H112 138 aa8.81□□□□□ -1
SS18-203ENST00000415083 CNTD2Q9H8S5 307 aa8.81□□□□□ -1
SS18-203ENST00000415083 TNFSF18Q9UNG2 199 aa8.81□□□□□ -1
SS18-203ENST00000415083 MED12Q93074 2177 aa8.81□□□□□ -1
SS18-203ENST00000415083 FRYQ5TBA9 3013 aa8.81□□□□□ -1
SS18-203ENST00000415083 TNRC18O15417 2968 aaPredicted RBP8.81□□□□□ -1
SS18-203ENST00000415083 ABCA7Q8IZY2 2146 aa8.8□□□□□ -1
SS18-203ENST00000415083 SPENQ96T58 3664 aaKnown RBP8.8□□□□□ -1
SS18-203ENST00000415083 A0A1W2PR77 199 aa8.8□□□□□ -1
SS18-203ENST00000415083 FAM74A7A6NL05 159 aa8.8□□□□□ -1
SS18-203ENST00000415083 OR2AT4A6NND4 320 aa8.8□□□□□ -1
SS18-203ENST00000415083 TO15178 435 aa8.8□□□□□ -1
SS18-203ENST00000415083 CDC40O60508 579 aaKnown RBP eCLIP8.8□□□□□ -1
SS18-203ENST00000415083 AQP8O94778 261 aa8.8□□□□□ -1
SS18-203ENST00000415083 HLA-DQA2P01906 255 aa8.8□□□□□ -1
SS18-203ENST00000415083 ATP1B3P54709 279 aa8.8□□□□□ -1
SS18-203ENST00000415083 FAM74A3Q4VXF1 159 aa8.8□□□□□ -1
SS18-203ENST00000415083 C1orf140Q5VVS0 124 aa8.8□□□□□ -1
SS18-203ENST00000415083 ARMC6Q6NXE6 501 aa8.8□□□□□ -1
SS18-203ENST00000415083 C11orf88Q6PI97 169 aa8.8□□□□□ -1
SS18-203ENST00000415083 ZNF627Q7L945 461 aa8.8□□□□□ -1
SS18-203ENST00000415083 TMED4Q7Z7H5 227 aa8.8□□□□□ -1
SS18-203ENST00000415083 ACBD4Q8NC06 268 aa8.8□□□□□ -1
SS18-203ENST00000415083 MARC2Q969Z3 335 aa8.8□□□□□ -1
SS18-203ENST00000415083 ADAT3Q96EY9 351 aaPredicted RBP8.8□□□□□ -1
SS18-203ENST00000415083 SLC25A44Q96H78 314 aaPredicted RBP8.8□□□□□ -1
SS18-203ENST00000415083 SEC22AQ96IW7 307 aa8.8□□□□□ -1
SS18-203ENST00000415083 MYOZ1Q9NP98 299 aaPredicted RBP8.8□□□□□ -1
SS18-203ENST00000415083 SLC22A11Q9NSA0 550 aa8.8□□□□□ -1
SS18-203ENST00000415083 RASL12Q9NYN1 266 aa8.8□□□□□ -1
SS18-203ENST00000415083 GDF2Q9UK05 429 aaPredicted RBP8.8□□□□□ -1
SS18-203ENST00000415083 GTF2A1LQ9UNN4 478 aa8.8□□□□□ -1
SS18-203ENST00000415083 TMEM14AQ9Y6G1 99 aa8.8□□□□□ -1
SS18-203ENST00000415083 LOC107986453A0A1B0GWG9 222 aa8.8□□□□□ -1
SS18-203ENST00000415083 C5orf63A6NC05 138 aa8.8□□□□□ -1
SS18-203ENST00000415083 HSPB2A8KAH6 182 aa8.8□□□□□ -1
SS18-203ENST00000415083 E9PLN8 166 aa8.8□□□□□ -1
SS18-203ENST00000415083 RAB3DO95716 219 aa8.8□□□□□ -1
SS18-203ENST00000415083 HPGDP15428 266 aa8.8□□□□□ -1
SS18-203ENST00000415083 CXCR1P25024 350 aa8.8□□□□□ -1
SS18-203ENST00000415083 RORAP35398 523 aa8.8□□□□□ -1
SS18-203ENST00000415083 ARRB1P49407 418 aaPredicted RBP8.8□□□□□ -1
SS18-203ENST00000415083 FOXK1P85037 733 aa8.8□□□□□ -1
SS18-203ENST00000415083 DEFA5Q01523 94 aa8.8□□□□□ -1
SS18-203ENST00000415083 SERTAD2Q14140 314 aa8.8□□□□□ -1
SS18-203ENST00000415083 HSPB2Q16082 182 aa8.8□□□□□ -1
SS18-203ENST00000415083 MOB3CQ70IA8 216 aa8.8□□□□□ -1
SS18-203ENST00000415083 OR52N4Q8NGI2 321 aa8.8□□□□□ -1
SS18-203ENST00000415083 METTL21AQ8WXB1 218 aa8.8□□□□□ -1
SS18-203ENST00000415083 CUTCQ9NTM9 273 aa8.8□□□□□ -1
SS18-203ENST00000415083 FAM206AQ9NX38 181 aa8.8□□□□□ -1
SS18-203ENST00000415083 PFDN2Q9UHV9 154 aa8.8□□□□□ -1
SS18-203ENST00000415083 DHDHQ9UQ10 334 aa8.8□□□□□ -1
SS18-203ENST00000415083 SESN1Q9Y6P5 492 aa8.8□□□□□ -1
SS18-203ENST00000415083 IGHV3-20A0A0C4DH32 117 aa8.8□□□□□ -1
SS18-203ENST00000415083 A0A1W2PQD3 144 aa8.8□□□□□ -1
SS18-203ENST00000415083 D6RAR5 112 aa8.8□□□□□ -1
SS18-203ENST00000415083 P2RY10O00398 339 aa8.8□□□□□ -1
SS18-203ENST00000415083 AMY2AP04746 511 aa8.8□□□□□ -1
SS18-203ENST00000415083 CENPAP49450 140 aa8.8□□□□□ -1
SS18-203ENST00000415083 PPP1R1AQ13522 171 aa8.8□□□□□ -1
SS18-203ENST00000415083 TOMM20Q15388 145 aa8.8□□□□□ -1
SS18-203ENST00000415083 NKPD1Q17RQ9 610 aa8.8□□□□□ -1
SS18-203ENST00000415083 SLC18B1Q6NT16 456 aa8.8□□□□□ -1
SS18-203ENST00000415083 CD163Q86VB7 1156 aa8.8□□□□□ -1
SS18-203ENST00000415083 PRSS58Q8IYP2 241 aa8.8□□□□□ -1
SS18-203ENST00000415083 C12orf45Q8N5I9 185 aaPredicted RBP8.8□□□□□ -1
SS18-203ENST00000415083 ASB10Q8WXI3 467 aa8.8□□□□□ -1
SS18-203ENST00000415083 C1orf147Q96MC9 270 aaPredicted RBP8.8□□□□□ -1
SS18-203ENST00000415083 MICU1Q9BPX6 476 aa8.8□□□□□ -1
SS18-203ENST00000415083 LDAHQ9H6V9 325 aa8.8□□□□□ -1
SS18-203ENST00000415083 TAS2R8Q9NYW2 309 aa8.8□□□□□ -1
SS18-203ENST00000415083 KCNK7Q9Y2U2 307 aa8.8□□□□□ -1
SS18-203ENST00000415083 R4GMQ9 66 aa8.8□□□□□ -1
SS18-203ENST00000415083 OR5H14A6NHG9 310 aa8.79□□□□□ -1
SS18-203ENST00000415083 TMEM200CA6NKL6 621 aa8.79□□□□□ -1
SS18-203ENST00000415083 SULT2B1O00204 365 aa8.79□□□□□ -1
SS18-203ENST00000415083 ISG15P05161 165 aa8.79□□□□□ -1
SS18-203ENST00000415083 CSN2P05814 226 aa8.79□□□□□ -1
SS18-203ENST00000415083 FOLR1P15328 257 aa8.79□□□□□ -1
SS18-203ENST00000415083 ADCYAP1P18509 176 aa8.79□□□□□ -1
SS18-203ENST00000415083 KLK2P20151 261 aa8.79□□□□□ -1
SS18-203ENST00000415083 AVPR2P30518 371 aa8.79□□□□□ -1
SS18-203ENST00000415083 DEFB133Q30KQ1 61 aa8.79□□□□□ -1
SS18-203ENST00000415083 SHISA6Q6ZSJ9 500 aa8.79□□□□□ -1
SS18-203ENST00000415083 HDDC2Q7Z4H3 204 aa8.79□□□□□ -1
SS18-203ENST00000415083 DCXRQ7Z4W1 244 aa8.79□□□□□ -1
SS18-203ENST00000415083 FAM219AQ8IW50 185 aa8.79□□□□□ -1
SS18-203ENST00000415083 C15orf40Q8WUR7 153 aa8.79□□□□□ -1
SS18-203ENST00000415083 TNFAIP8L1Q8WVP5 186 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms