RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TRIQKQ629K1 86 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 MEPCEQ7L2J0 689 aaKnown RBP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 TUSC5Q8IXB3 177 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 UBE2J2Q8N2K1 259 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 OR6X1Q8NH79 312 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 SMAP2Q8WU79 429 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 SLC25A44Q96H78 314 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 H2AFY2Q9P0M6 372 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 PCNX1Q96RV3 2341 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 ARHGAP21Q5T5U3 1957 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 OR14I1A6ND48 311 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 SLC22A20A6NK97 555 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 ORC5O43913 435 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 TSC22D2O75157 780 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 ZNF432O94892 652 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 CDRT1O95170 752 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 ATF4P18848 351 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 HTR1FP30939 366 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 MTNR1AP48039 350 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 KRTCAP3Q53RY4 240 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 LINC01590Q5TEZ4 76 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 ZNF585AQ6P3V2 769 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 C19orf18Q8NEA5 215 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 OR4F15Q8NGB8 312 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 AKAP1Q92667 903 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 ZMYND19Q96E35 227 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-202ENST00000414700 RNFT2Q96EX2 444 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 OR2M2Q96R28 347 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 TRIB1Q96RU8 372 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 CLCF1Q9UBD9 225 aa13.74□□□□□ -0.21
SHMT2-202ENST00000414700 SLC16A7O60669 478 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RENP00797 406 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 MRPL3P09001 348 aaKnown RBP13.73□□□□□ -0.21
SHMT2-202ENST00000414700 FAM157BP0CG42 384 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 ARSBP15848 533 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 HNRNPA0Q13151 305 aaKnown RBP13.73□□□□□ -0.21
SHMT2-202ENST00000414700 ST3GAL2Q16842 350 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 PHYHD1Q5SRE7 291 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 TEX261Q6UWH6 196 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 C3P1Q6ZMU1 363 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 GID4Q8IVV7 300 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 TMEM123Q8N131 208 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 GALNT11Q8NCW6 608 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 OR6K6Q8NGW6 343 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RFKQ969G6 155 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 MARVELD1Q9BSK0 173 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 PLEKHB1Q9UF11 243 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RPL36Q9Y3U8 105 aaKnown RBP13.73□□□□□ -0.21
SHMT2-202ENST00000414700 U3KQ87 197 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 A6NIZ1 184 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 TTLL8A6PVC2 850 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 IGHG1P01857 330 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 TPOP07202 933 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RAP1BP61224 184 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RAP1AP62834 184 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RPTNQ6XPR3 784 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 GLCCI1Q86VQ1 547 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RPRMLQ8N4K4 120 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 ZNF511Q8NB15 262 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 NOXO1Q8NFA2 376 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 PROKR2Q8NFJ6 384 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 OR51G2Q8NGK0 314 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 ALG12Q9BV10 488 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 MND1Q9BWT6 205 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 RNF122Q9H9V4 155 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 CALHM2Q9HA72 323 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 KLHL9Q9P2J3 617 aa13.73□□□□□ -0.21
SHMT2-202ENST00000414700 POLEQ07864 2286 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 IGKV3D-15A0A087WSY6 115 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 IGLV1-36A0A0B4J1U3 117 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 FAM240BA0A1B0GVZ2 78 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 ZNF726A6NNF4 738 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 SLC2A2P11168 524 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-202ENST00000414700 SLC25A1P53007 311 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 CLRN1P58418 232 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 BAMBIQ13145 260 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 SPHARQ15513 63 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 ACSF3Q4G176 576 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-202ENST00000414700 CDH24Q86UP0 819 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 CD163Q86VB7 1156 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 GCNT2Q8N0V5 402 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 OR8H3Q8N146 312 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 ZNF680Q8NEM1 530 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 UPRTQ96BW1 309 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 B9D1Q9UPM9 204 aa13.72□□□□□ -0.21
SHMT2-202ENST00000414700 NCOA6Q14686 2063 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-202ENST00000414700 SLC22A31A6NKX4 558 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 ATP6V1G2-DDX39BF2Z307 99 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 LYRM1O43325 122 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 IGHV3-9P01782 118 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 ZNF250P15622 560 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 HCCSP53701 268 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 MXD1Q05195 221 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 MLLT11Q13015 90 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-202ENST00000414700 HIST3H3Q16695 136 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 RTL6Q6ICC9 239 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 LRFN4Q6PJG9 635 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 COMMD7Q86VX2 200 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 OR52I1Q8NGK6 324 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms