RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PAQR4Q8N4S7 273 aaPredicted RBP12.65□□□□□ -0.38
CHD1-202ENST00000414220 ZNF540Q8NDQ6 660 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 FAM168AQ92567 244 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 CENPNQ96H22 339 aaPredicted RBP12.65□□□□□ -0.38
CHD1-202ENST00000414220 PITX2Q99697 317 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 COQ7Q99807 217 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 RBM4Q9BWF3 364 aaKnown RBP12.65□□□□□ -0.38
CHD1-202ENST00000414220 OSBPL10Q9BXB5 764 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 NTN4Q9HB63 628 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 TAAR3PQ9P1P4 343 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 FZR1Q9UM11 496 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 USF3Q68DE3 2245 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 TMEM129A0AVI4 362 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 TRIM64A6NGJ6 449 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 TRIM64BA6NI03 449 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
CHD1-202ENST00000414220 RER1O15258 196 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 ICMTO60725 284 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 GPANK1O95872 356 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 TP53P04637 393 aaPredicted RBP12.64□□□□□ -0.39
CHD1-202ENST00000414220 PYCR1P32322 319 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 CRISP1P54107 249 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 ACTR3P61158 418 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 PPP1CBP62140 327 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 TNK1Q13470 666 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 MEP1BQ16820 701 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 CCDC92Q53HC0 331 aaPredicted RBP12.64□□□□□ -0.39
CHD1-202ENST00000414220 ZMAT1Q5H9K5 638 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 OR9Q1Q8NGQ5 310 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 OR6K6Q8NGW6 343 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 SORCS2Q96PQ0 1159 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 DDOQ99489 341 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 KRT84Q9NSB2 600 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 CGGBP1Q9UFW8 167 aaPredicted RBP12.64□□□□□ -0.39
CHD1-202ENST00000414220 LHFPL6Q9Y693 200 aa12.64□□□□□ -0.39
CHD1-202ENST00000414220 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 LOC390937A0A1W2PQ73 354 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 TFP02787 698 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 SPI1P17947 270 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 HIST1H3AP68431 136 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 CDK5Q00535 292 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 TAF13Q15543 124 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 SNAPC1Q16533 368 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 CARTPTQ16568 116 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 PCGF3Q3KNV8 242 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
CHD1-202ENST00000414220 HIST2H3PS2Q5TEC6 136 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 MBNL2Q5VZF2 373 aaKnown RBP12.63□□□□□ -0.39
CHD1-202ENST00000414220 FAHD1Q6P587 224 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 HIST2H3AQ71DI3 136 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 IQCF1Q8N6M8 205 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 OR51L1Q8NGJ5 315 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 SLC25A40Q8TBP6 338 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 LRTOMTQ8WZ04 291 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 SPTSSAQ969W0 71 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 COX4I2Q96KJ9 171 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 PIMREGQ9BSJ6 248 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 CYB5R1Q9UHQ9 305 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 ORC6Q9Y5N6 252 aa12.63□□□□□ -0.39
CHD1-202ENST00000414220 PLCE1Q9P212 2302 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 IGHV3-13P01766 116 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 SPARCP09486 303 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 DAOP14920 347 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 WNT5AP41221 380 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 ALDH3B1P43353 468 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 ENTPD1P49961 510 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 DAPP51397 102 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 TPTEP56180 551 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 KPNB1Q14974 876 aaKnown RBP12.62□□□□□ -0.39
CHD1-202ENST00000414220 FAM209AQ5JX71 171 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 OTPQ5XKR4 325 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 ACSM5Q6NUN0 579 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 CORO6Q6QEF8 472 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 SHFQ7M4L6 423 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 LRP11Q86VZ4 500 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 ZNF101Q8IZC7 436 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 ZNF525Q8N782 197 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 KLF14Q8TD94 323 aaPredicted RBP12.62□□□□□ -0.39
CHD1-202ENST00000414220 UBASH3BQ8TF42 649 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 PYDC1Q8WXC3 89 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 PTP4A1Q93096 173 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 APOBEC3DQ96AK3 386 aaPredicted RBP12.62□□□□□ -0.39
CHD1-202ENST00000414220 ATF6BQ99941 703 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 NMNAT2Q9BZQ4 307 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 OR2J1Q9GZK6 312 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 OR51V1Q9H2C8 321 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 SEMA6AQ9H2E6 1030 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 SLC25A19Q9HC21 320 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 HINT3Q9NQE9 182 aaKnown RBP12.62□□□□□ -0.39
CHD1-202ENST00000414220 DLL4Q9NR61 685 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 DECR2Q9NUI1 292 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
CHD1-202ENST00000414220 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.62□□□□□ -0.39
CHD1-202ENST00000414220 H2AFY2Q9P0M6 372 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms