RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 AGTRAPQ6RW13 159 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM91Q6ZNR0 172 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 NAXDQ8IW45 347 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 ZDHHC23Q8IYP9 409 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 Q8N1Y9 231 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 C11orf44Q8N8P7 122 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 NRGNQ92686 78 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SLC35A5Q9BS91 424 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 TMPRSS13Q9BYE2 586 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 METTL21EPA6NDL7 271 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 E7EQ34 232 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 F8W036 122 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 H7C2Y5 167 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 M0QYG6 137 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 TMPRSS2O15393 492 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SH3BGRLO75368 114 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SOX30O94993 753 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 CHRM4P08173 479 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SYPP08247 313 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 ELAVL4P26378 380 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 RIDAP52758 137 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 GAS1P54826 345 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 RPS7P62081 194 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 TBPL1P62380 186 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 HSD11B2P80365 405 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 NHLH1Q02575 133 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 C5orf64Q2M2E5 130 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 IDNKQ5T6J7 187 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 LYPD4Q6UWN0 246 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SMIM15Q7Z3B0 74 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 BCDIN3DQ7Z5W3 292 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 Q8NA96 180 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 MARCH1Q8TCQ1 289 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 WIPF2Q8TF74 440 aaPredicted RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 YIPF5Q969M3 257 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 KLHDC7BQ96G42 594 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SCARF2Q96GP6 870 aaPredicted RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 C12orf57Q99622 126 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 BCL2L14Q9BZR8 327 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 MYEF2Q9P2K5 600 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 NDRG3Q9UGV2 375 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 ING1Q9UK53 422 aaPredicted RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 FLVCR2Q9UPI3 526 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 PQLC2LA1A4F0 135 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 FITM1A5D6W6 292 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
SNHG3-201ENST00000413987 LAMTOR5O43504 91 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 NCR1O76036 304 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 ADRB1P08588 477 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 TDGF1P13385 188 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 ANXA7P20073 488 aaKnown RBP8.43□□□□□ -1.06
SNHG3-201ENST00000413987 CD22P20273 847 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 DTYMKP23919 212 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 CD38P28907 300 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 GINS1Q14691 196 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 KCNMB1Q16558 191 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 SLC36A2Q495M3 483 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 PABPC1L2AQ5JQF8 200 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 CBLN3Q6UW01 205 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 BAIAP2L2Q6UXY1 529 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 PDZD9Q8IXQ8 264 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 PRSS58Q8IYP2 241 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 GPR135Q8IZ08 494 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 LINC01555Q8NAE3 123 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 OR5K2Q8NHB8 316 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 MTERF1Q99551 399 aaKnown RBP8.43□□□□□ -1.06
SNHG3-201ENST00000413987 MESP1Q9BRJ9 268 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 TIMM29Q9BSF4 260 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 TMED9Q9BVK6 235 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 SLC19A3Q9BZV2 496 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 METTL17Q9H7H0 456 aaPredicted RBP8.43□□□□□ -1.06
SNHG3-201ENST00000413987 HS3ST3A1Q9Y663 406 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 CABIN1Q9Y6J0 2220 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 FREM2Q5SZK8 3169 aa8.43□□□□□ -1.06
SNHG3-201ENST00000413987 CBY3A6NI87 242 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 D6RAR5 112 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 GNB5O14775 395 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 FFAR1O14842 300 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 SLC16A5O15375 505 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 NUPL2O15504 423 aaKnown RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 OGG1O15527 345 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 RP2O75695 350 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 RAD51DO75771 328 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 MPIG6BO95866 241 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 GIPP09681 153 aaPredicted RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 NFYAP23511 347 aaPredicted RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 RAP2BP61225 183 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 CDK5Q00535 292 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 RPE65Q16518 533 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 SPDYE7PQ495Y7 208 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 REEP3Q6NUK4 255 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 CXXC5Q7LFL8 322 aaKnown RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 THOC6Q86W42 341 aaKnown RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 SPICQ8N5J4 248 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 ZNF485Q8NCK3 441 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 DAZLQ92904 295 aaKnown RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 FGF11Q92914 225 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 NEIL2Q969S2 332 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms