RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 KCNG2Q9UJ96 466 aa11.32□□□□□ -0.6
HDAC8-210ENST00000412342 NDRG4Q9ULP0 352 aaKnown RBP11.32□□□□□ -0.6
HDAC8-210ENST00000412342 SPEF1Q9Y4P9 236 aa11.32□□□□□ -0.6
HDAC8-210ENST00000412342 F8P00451 2351 aa11.32□□□□□ -0.6
HDAC8-210ENST00000412342 FLNAP21333 2647 aaKnown RBP11.31□□□□□ -0.6
HDAC8-210ENST00000412342 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 E9PQ18 207 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 NGFP01138 241 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 ALPLP05186 524 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 SLC2A5P22732 501 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 IGFBP5P24593 272 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 POLR2IP36954 125 aaKnown RBP11.31□□□□□ -0.6
HDAC8-210ENST00000412342 RPS27P42677 84 aaKnown RBP11.31□□□□□ -0.6
HDAC8-210ENST00000412342 HTR5AP47898 357 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 EVX1P49640 407 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 ATP5J2P56134 94 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 RPS23P62266 143 aaKnown RBP11.31□□□□□ -0.6
HDAC8-210ENST00000412342 TEX30Q5JUR7 227 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 ELFN2Q5R3F8 820 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 SHEQ5VZ18 495 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 C12orf73Q69YU5 71 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 PLBD1Q6P4A8 553 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 TGIF2LYQ8IUE0 185 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 C10orf67Q8IYJ2 551 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 PQLC1Q8N2U9 271 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 GJC3Q8NFK1 279 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 OR10H5Q8NGA6 315 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 COQ7Q99807 217 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 BCL2L14Q9BZR8 327 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 HDHD2Q9H0R4 259 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 OR51B6Q9H340 312 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 USE1Q9NZ43 259 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 POLR1DQ9Y2S0 133 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 CMAHPQ9Y471 501 aa11.31□□□□□ -0.6
HDAC8-210ENST00000412342 ANKRD65E5RJM6 399 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 EI24O14681 340 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 PRKYO43930 277 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 GLCEO94923 617 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 HLA-DQA2P01906 255 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 DBHP09172 617 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 ZNF250P15622 560 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 CCNOP22674 350 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 FMO3P31513 532 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 RAD52P43351 418 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 PPOXP50336 477 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 SNRPD2P62316 118 aaKnown RBP11.3□□□□□ -0.6
HDAC8-210ENST00000412342 RGS7BPQ6MZT1 257 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-210ENST00000412342 CPOQ8IVL8 374 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 TIGD4Q8IY51 512 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 BBS1Q8NFJ9 593 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 TRMT61AQ96FX7 289 aaKnown RBP11.3□□□□□ -0.6
HDAC8-210ENST00000412342 MARS2Q96GW9 593 aaKnown RBP11.3□□□□□ -0.6
HDAC8-210ENST00000412342 C4orf45Q96LM5 186 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 SORCS2Q96PQ0 1159 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
HDAC8-210ENST00000412342 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 TVP23BQ9NYZ1 205 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 FZR1Q9UM11 496 aa11.3□□□□□ -0.6
HDAC8-210ENST00000412342 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 PRR23D1E9PI22 279 aaPredicted RBP11.29□□□□□ -0.6
HDAC8-210ENST00000412342 M0R129 80 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 PRODHO43272 600 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 CLPTM1O96005 669 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 LCKP06239 509 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 PRR23D2P0DMB1 279 aaPredicted RBP11.29□□□□□ -0.6
HDAC8-210ENST00000412342 ZNF823P16415 610 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 PAICSP22234 425 aaKnown RBP11.29□□□□□ -0.6
HDAC8-210ENST00000412342 ENTPD1P49961 510 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 BLVRAP53004 296 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 SNAPC1Q16533 368 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 CXXC5Q7LFL8 322 aaKnown RBP11.29□□□□□ -0.6
HDAC8-210ENST00000412342 OR1J1Q8NGS3 322 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 OR6K6Q8NGW6 343 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 ABHD4Q8TB40 342 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 SLC25A40Q8TBP6 338 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 ST7LQ8TDW4 575 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 DCLRE1CQ96SD1 692 aaKnown RBP11.29□□□□□ -0.6
HDAC8-210ENST00000412342 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 OR51V1Q9H2C8 321 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 POFUT1Q9H488 388 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 DLL4Q9NR61 685 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
HDAC8-210ENST00000412342 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 ENOPH1Q9UHY7 261 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 PMF1-BGLAPU3KQ54 211 aa11.29□□□□□ -0.6
HDAC8-210ENST00000412342 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 VSTM5A8MXK1 200 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 ZNF593O00488 134 aaPredicted RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 ABHD16AO95870 558 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 BMP4P12644 408 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 GSTT1P30711 240 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 MPV17P39210 176 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 ALDH3A2P51648 485 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 PPP1CBP62140 327 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 MAD2L1BPQ15013 274 aaPredicted RBP11.28□□□□□ -0.6
HDAC8-210ENST00000412342 SLC35D3Q5M8T2 416 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 SPATA46Q5T0L3 261 aa11.28□□□□□ -0.6
HDAC8-210ENST00000412342 AADACL4Q5VUY2 407 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms