RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 WNT8BQ93098 351 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM56Q96MV1 263 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TMUB1Q9BVT8 246 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GEMIN7Q9H840 131 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SLC52A3Q9NQ40 469 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ACSS2Q9NR19 701 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ADGBQ8N7X0 1667 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TRBV7-9A0A0J9YWB2 115 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 FCN1O00602 326 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM50AO95807 157 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MT-CO3P00414 261 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SLC35E2BP0CK96 405 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CD37P11049 281 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 UNGP13051 313 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 OR1D2P34982 312 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SRP14P37108 136 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SNRPD2P62316 118 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 POU3F1Q03052 451 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ASAH1Q13510 395 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MRPL58Q14197 206 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PAFAH1B3Q15102 231 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CFAP161Q6P656 301 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 KIAA1191Q96A73 305 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 COQ10BQ9H8M1 238 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 RETNQ9HD89 108 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM38BQ9NVV0 291 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 DNAJB12Q9NXW2 375 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 NTMQ9P121 344 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CLN8Q9UBY8 286 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 AUP1Q9Y679 476 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CROCC2H7BZ55 1655 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 A0A087X0M5 115 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 A0A1B0GX30 115 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 GRXCR1A8MXD5 290 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 K7N7A8 449 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 GSTZ1O43708 216 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PMS2P2O95744 297 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PTHLHP12272 177 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ACRV1P26436 265 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CORO1AP31146 461 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 NUMBP49757 651 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SLBPQ14493 270 aaKnown RBP eCLIP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 GPNMBQ14956 572 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 GTDC1Q4AE62 458 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CALHM3Q86XJ0 350 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM217Q8N7C4 229 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MTMR14Q8NCE2 650 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ASB9Q96DX5 294 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 GSX2Q9BZM3 304 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PRTFDC1Q9NRG1 225 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SEMA4GQ9NTN9 838 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CES1P1Q9UKY3 287 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CORINQ9Y5Q5 1042 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CEMIPQ8WUJ3 1361 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PHF1O43189 567 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 LRCH4O75427 683 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MRPL3P09001 348 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 HIST1H1TP22492 207 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 KIR2DS2P43631 304 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PCBP4P57723 403 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SLC10A2Q12908 348 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ZFAND6Q6FIF0 208 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM40Q8WWA1 233 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 YIPF6Q96EC8 236 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 WDR34Q96EX3 536 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 GALNT14Q96FL9 552 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 LMF1Q96S06 567 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MCHR1Q99705 422 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SLC25A2Q9BXI2 301 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 MS4A5Q9H3V2 200 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SEBOXQ9HB31 216 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 BLACEA4D250 179 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 NPFFO15130 113 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 HRO43593 1189 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 T-ENOLP0DO92 83 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 HMGCLP35914 325 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 BST1Q10588 318 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF260Q3ZCT1 412 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 C10orf128Q5T292 105 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF480Q8WV37 535 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM158Q8WZ71 300 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PHYHIPQ92561 330 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 TFAP2CQ92754 450 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 LHX4Q969G2 390 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 GJD4Q96KN9 370 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SLC6A18Q96N87 628 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 SPATA25Q9BR10 227 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 C19orf24Q9BVV8 132 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 EPHX3Q9H6B9 360 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 BPIFA1Q9NP55 256 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CNOT2Q9NZN8 540 aaKnown RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 VPS29Q9UBQ0 182 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 AMMECR1Q9Y4X0 333 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 A0A1B0GWB2 263 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 KDM4FA0A1W2PPD8 638 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 NPIPB15A6NHN6 443 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-202ENST00000411767 CD8B2A6NJW9 211 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 IQCF5A8MTL0 148 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 E5RJQ4 531 aa4.22□□□□□ -1.73
PTPN13-202ENST00000411767 PRKRAO75569 313 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms