RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 HRO43593 1189 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 UBALD2Q8IYN6 164 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 FNDC8Q8TC99 324 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 TMEM106AQ96A25 262 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 SLCO4A1Q96BD0 722 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 PLPPR2Q96GM1 343 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 PDLIM7Q9NR12 457 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 ZNF391Q9UJN7 358 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 KEAP1Q14145 624 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 ZNF628Q5EBL2 1059 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 SRRQ9GZT4 340 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 SLC17A4Q9Y2C5 497 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 R4GN57 208 aa10.27□□□□□ -0.76
PRPF40A-202ENST00000410080 RNF224P0DH78 156 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 LHFPL2Q6ZUX7 228 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 LSMEM2Q8N112 164 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 AAMDCQ9H7C9 122 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 NRAPQ86VF7 1730 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 C5orf46Q6UWT4 87 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 ZNF573Q86YE8 665 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 PLA2G12AQ9BZM1 189 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 IL17CQ9P0M4 197 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 OSGIN1Q9UJX0 560 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 KIF26BQ2KJY2 2108 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 MYLKQ15746 1914 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 MBLAC1A4D2B0 266 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 SDCBPO00560 298 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 WDR1O75083 606 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 BMP5P22003 454 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 SIX1Q15475 284 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 ZNF766Q5HY98 468 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 OR10K2Q6IF99 312 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 GLIPR1L1Q6UWM5 242 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 LILRB1Q8NHL6 650 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 SLC29A1Q99808 456 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 CGGBP1Q9UFW8 167 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 TOGARAM1Q9Y4F4 1720 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 J3KRW8 73 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 HAX1O00165 279 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 NAGAP17050 411 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 TCEAL1Q15170 157 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 SLC5A12Q1EHB4 618 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 PDZD11Q5EBL8 140 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 LCN8Q6JVE9 175 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 GPR150Q8NGU9 434 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 ZNF251Q9BRH9 671 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 MED9Q9NWA0 146 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 USP22Q9UPT9 525 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 ZNF266Q14584 549 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 HENMT1Q5T8I9 393 aaKnown RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 C1orf140Q5VVS0 124 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 KDM4DQ6B0I6 523 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 MBOAT2Q6ZWT7 520 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 SLC15A4Q8N697 577 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 ZNF784Q8NCA9 323 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 PATE1Q8WXA2 126 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 EXOSC3Q9NQT5 275 aaKnown RBP10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 TAS2R5Q9NYW4 299 aa10.27□□□□□ -0.77
PRPF40A-202ENST00000410080 LOC100289279A0A1B0GTE1 492 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 NRASP01111 189 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SRP9P49458 86 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 MAP2K6P52564 334 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 OR2AE1Q8NHA4 323 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 ZNF764Q96H86 408 aaPredicted RBP10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SLA2Q9H6Q3 261 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SAGE1Q9NXZ1 904 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 PPP6CO00743 305 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SRMP19623 302 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 WBP2Q969T9 261 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 HS3ST3A1Q9Y663 406 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 CABIN1Q9Y6J0 2220 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 ACOT8O14734 319 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SULT1A3P0DMM9 295 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SULT1A4P0DMN0 295 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 APOBEC1P41238 236 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 OR2G3Q8NGZ4 309 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 R3HDMLQ9H3Y0 253 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 CHD3Q12873 2000 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 MS4A18H0YCH9 400 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 PRAF2O60831 178 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 TACR1P25103 407 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 OPRL1P41146 370 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 ALKBH1Q13686 389 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 MS4A18Q3C1V0 323 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 OR2G6Q5TZ20 316 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 KIAA1958Q8N8K9 716 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 OR2M3Q8NG83 312 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 PLA2G3Q9NZ20 509 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 NDUFB3O43676 98 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SOX15O60248 233 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 SBK2P0C263 348 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 DUSP1P28562 367 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 ASCL1P50553 236 aa10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 PCBP3P57721 371 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-202ENST00000410080 RPL22L1Q6P5R6 122 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms