RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 YIPF3Q9GZM5 350 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 C1orf198Q9H425 327 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 ERVK-18Q9QC07 812 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 FBXL3Q9UKT7 428 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 LOC100509620A0A075B734 347 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 DAPL1A0PJW8 107 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 SIAH2O43255 324 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 SYNGR3O43761 229 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 UTP20O75691 2785 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 CBR1P16152 277 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 ZNF14P17017 642 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 ALOX5APP20292 161 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 ANOS1P23352 680 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 CRHBPP24387 322 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 ARR3P36575 388 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 CDH15P55291 814 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 PCBD1P61457 104 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 CSNK2BP67870 215 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 POU4F2Q12837 409 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 TEX30Q5JUR7 227 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 ELFN2Q5R3F8 820 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 NAA40Q86UY6 237 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 P2RY8Q86VZ1 359 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 TSPAN14Q8NG11 270 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 BOD1Q96IK1 185 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 COPS4Q9BT78 406 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 BRD7Q9NPI1 651 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 SLCO1C1Q9NYB5 712 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 CLEC2DQ9UHP7 191 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 IKZF2Q9UKS7 526 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 EXOGQ9Y2C4 368 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 PKDREJQ9NTG1 2253 aa12.25□□□□□ -0.45
CHRNA1-204ENST00000409323 C5orf49A4QMS7 147 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 ZNF670-ZNF695F2Z2N8 137 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 F5H5K5 113 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 J3QRE1 110 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 FADS2O95864 444 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 SLC2A1P11166 492 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 EEF1B2P24534 225 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 STOMP27105 288 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 CALCRP30988 508 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 RPL5P46777 297 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 ETV1P50549 477 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 PRKXP51817 358 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 HGFACQ04756 655 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 PLP2Q04941 152 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 RAB40BQ12829 278 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 TMED1Q13445 227 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 RAB35Q15286 201 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 TAF13Q15543 124 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 TP53I3Q53FA7 332 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 ZNF322Q6U7Q0 402 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 DMRTC2Q8IXT2 367 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 STX19Q8N4C7 294 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 OR1F12Q8NHA8 337 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 PLCXD1Q9NUJ7 323 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 SCN3BQ9NY72 215 aa12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 KLF2Q9Y5W3 355 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-204ENST00000409323 A0A087WXM4 84 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 IQCMA0A1B0GVH7 501 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 DPPA5A6NC42 116 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 DPRXA6NFQ7 191 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 CLPTM1O96005 669 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 IGKV3-15P01624 115 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 SERPINA5P05154 406 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 OR2T7P0C7T2 308 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 PPP3CBP16298 524 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 IGFBP2P18065 325 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 GABARAPL2P60520 117 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 HIST1H3AP68431 136 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 BSPH1Q075Z2 132 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 KLHL22Q53GT1 634 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 HIST2H3PS2Q5TEC6 136 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 OR2G6Q5TZ20 316 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 HIST2H3AQ71DI3 136 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 KRT77Q7Z794 578 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 SYT9Q86SS6 491 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 CCDC36Q8IYA8 594 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 ACBD7Q8N6N7 88 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 SLC30A7Q8NEW0 376 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 OR2T27Q8NH04 317 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 PLPPR2Q96GM1 343 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 RADILQ96JH8 1075 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 ATF6BQ99941 703 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 OR10A4Q9H209 315 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 DUSP21Q9H596 190 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 OBP2BQ9NPH6 170 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 MRPS18AQ9NVS2 196 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 LRP12Q9Y561 859 aa12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 ANKHD1Q8IWZ3 2542 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-204ENST00000409323 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-204ENST00000409323 C5orf63A6NC05 138 aa12.22□□□□□ -0.45
CHRNA1-204ENST00000409323 EFCAB10A6NFE3 127 aa12.22□□□□□ -0.45
CHRNA1-204ENST00000409323 CASKO14936 926 aa12.22□□□□□ -0.45
CHRNA1-204ENST00000409323 MRPS14O60783 128 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms