RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 DHFR2Q86XF0 187 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 SAMD8Q96LT4 415 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 COG8Q96MW5 612 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 DIRC2Q96SL1 478 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 IFT27Q9BW83 186 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 C1orf21Q9H246 121 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 KLHL21Q9UJP4 597 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 CUBNO60494 3623 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 SVEP1Q4LDE5 3571 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 IGHV1-69-2A0A0G2JMI3 117 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 TNFRSF11BO00300 401 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 MPZL1O95297 269 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 HIST1H1CP16403 213 aaKnown RBP12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 HNF1AP20823 631 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 NOS3P29474 1203 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 HIST1H3AP68431 136 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 CCDC92Q53HC0 331 aaPredicted RBP12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 HIST2H3PS2Q5TEC6 136 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 RINLQ6ZS11 566 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 HIST2H3AQ71DI3 136 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 ZBTB46Q86UZ6 589 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 GJC3Q8NFK1 279 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 OR4C15Q8NGM1 316 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 OR4K13Q8NH42 304 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 CLDND2Q8NHS1 167 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 GTF3AQ92664 365 aaKnown RBP12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 TSSK2Q96PF2 358 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 DCLRE1CQ96SD1 692 aaKnown RBP12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 NMNAT3Q96T66 252 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 BTBD10Q9BSF8 475 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 SAP30LQ9HAJ7 183 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 DECR2Q9NUI1 292 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 IL20Q9NYY1 176 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 ZDHHC8Q9ULC8 765 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 B9D1Q9UPM9 204 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 POLR1DQ9Y2S0 133 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 LHFPL6Q9Y693 200 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 CDH10Q9Y6N8 788 aa12.66□□□□□ -0.38
SMIM11A-203ENST00000399299 ZSCAN5BA6NJL1 495 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 B4DSR2 109 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 RER1O15258 196 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 PPIHO43447 177 aaKnown RBP12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 IGHV1-46P01743 117 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 THBS2P35442 1172 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 RGS6P49758 472 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 MS4A2Q01362 244 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 COX10Q12887 443 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 PSG7Q13046 419 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 FAM98BQ52LJ0 330 aaKnown RBP12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 ZNF770Q6IQ21 691 aaPredicted RBP12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 USP51Q70EK9 711 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 OR6V1Q8N148 313 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 SLC26A10Q8NG04 563 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 OR9Q2Q8NGE9 314 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 OR52L1Q8NGH7 329 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 ASB9Q96DX5 294 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 ELMOD3Q96FG2 381 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 MDFIQ99750 246 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 COQ7Q99807 217 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 HDHD2Q9H0R4 259 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 GRIP1Q9Y3R0 1128 aa12.65□□□□□ -0.38
SMIM11A-203ENST00000399299 OR6C68A6NDL8 312 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 BHLHE40O14503 412 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 TPD52L2O43399 206 aaKnown RBP12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 SPRY3O43610 288 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 CDC14BO60729 498 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 CCNB2O95067 398 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 CD55P08174 381 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 SRD5A1P18405 259 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 KITLGP21583 273 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 PCMT1P22061 227 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 CENPAP49450 140 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 DVL1P1P54792 670 aaPredicted RBP12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 CDK5R2Q13319 367 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 CCNIQ14094 377 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 GK3PQ14409 553 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 TSTQ16762 297 aaKnown RBP12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 MEP1BQ16820 701 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 HFEQ30201 348 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 SLC36A3Q495N2 470 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 OTPQ5XKR4 325 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 OR2T5Q6IEZ7 315 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 RASSF6Q6ZTQ3 369 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 OR2T29Q8NH02 315 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 EGLN3Q9H6Z9 239 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 SRA1Q9HD15 236 aaKnown RBP12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 RPRD1BQ9NQG5 326 aaKnown RBP12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 FAM53CQ9NYF3 392 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 TAS2R1Q9NYW7 299 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 STARD10Q9Y365 291 aa12.64□□□□□ -0.39
SMIM11A-203ENST00000399299 CLDN25C9JDP6 229 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 WNT9BO14905 357 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 TIMM8AO60220 97 aaPredicted RBP12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 GPANK1O95872 356 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 LMO4P61968 165 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms