RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SLC22A7Q9Y694 548 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 A0A1W2PPC1 479 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 H0YGG7 62 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 BPNT1O95861 308 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 CEACAM5P06731 702 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 NQO2P16083 231 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF14P17017 642 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 HTR2CP28335 458 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 GNALP38405 381 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 DNASE1L1P49184 302 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ARF3P61204 181 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 FABP9Q0Z7S8 132 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 GPR18Q14330 331 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 CEBPEQ15744 281 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 EIF2S3LQ2VIR3 472 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 TMEM52BQ4KMG9 183 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF425Q6IV72 752 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 PAPD4Q6PIY7 484 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 CBLN3Q6UW01 205 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 TRAPPC6BQ86SZ2 158 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 KDM8Q8N371 416 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 CAMKVQ8NCB2 501 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 OR9A4Q8NGU2 314 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 RERGQ96A58 199 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 RRNAD1Q96FB5 475 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 RBM18Q96H35 190 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ZC3H10Q96K80 434 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 SERINC2Q96SA4 455 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 PHB2Q99623 299 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 RSPH9Q9H1X1 276 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 RHOFQ9HBH0 211 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 GHRLQ9UBU3 117 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 SPACA6W5XKT8 324 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 M0R036 132 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 STK17BO94768 372 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 TPT1P13693 172 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 RPS4Y1P22090 263 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 CD1CP29017 333 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 HRH1P35367 487 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 DRD3P35462 400 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ADPRHP54922 357 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 F2RL1P55085 397 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 PMPCAQ10713 525 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 GGTLC2Q14390 218 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 EBPQ15125 230 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ELOCQ15369 112 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 PRICKLE4Q2TBC4 344 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 FAM76BQ5HYJ3 339 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 C1QL3Q5VWW1 255 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ADAM5Q6NVV9 412 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 FIGLAQ6QHK4 219 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 SAMD14Q8IZD0 417 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF615Q8N8J6 731 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF563Q8TA94 476 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 MARCH1Q8TCQ1 289 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 AKR1E2Q96JD6 320 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 CCDC3Q9BQI4 270 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC25A21Q9BQT8 299 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 NAA11Q9BSU3 229 aaPredicted RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 LAT2Q9GZY6 243 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 ZBP1Q9H171 429 aa8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 MRPS33Q9Y291 106 aaKnown RBP8.89□□□□□ -0.99
PTCHD4-202ENST00000398738 A0A1W2PQU0 124 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 C1orf196B1AJZ1 125 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 SHISA8B8ZZ34 492 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 OIP5O43482 229 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 MED6O75586 246 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 LY86O95711 162 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 CD14P08571 375 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 RCC1P18754 421 aaPredicted RBP8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 CD96P40200 585 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 RPS15AP62244 130 aaKnown RBP8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 BIKQ13323 160 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 CLINT1Q14677 625 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 C9orf152Q5JTZ5 239 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 TMEM31Q5JXX7 168 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 CLEC9AQ6UXN8 241 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 SPRED2Q7Z698 418 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 FJX1Q86VR8 437 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 FRMD1Q8N878 549 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 RNF141Q8WVD5 230 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 INTS14Q96SY0 518 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 MRI1Q9BV20 369 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 CKLFQ9UBR5 152 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC27A6Q9Y2P4 619 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 SPAG17Q6Q759 2223 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 C9orf170A2RU37 121 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 POM121BA6NF01 834 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 HCRTR1O43613 425 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 LRP3O75074 770 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 MPZL1O95297 269 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 SFTA3P0C7M3 94 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 GNB3P16520 340 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 PSMB6P28072 239 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 RBM34P42696 430 aaKnown RBP8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 NPY4RP50391 375 aa8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 NR0B1P51843 470 aaKnown RBP8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 RPL18Q07020 188 aaKnown RBP8.88□□□□□ -0.99
PTCHD4-202ENST00000398738 FHL5Q5TD97 284 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms