RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PIN1Q13526 163 aaPredicted RBP14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 ENDOGQ14249 297 aaKnown RBP14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 ZNF181Q2M3W8 571 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 C1orf87Q8N0U7 546 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 TMEM86BQ8N661 226 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 PCYOX1LQ8NBM8 494 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 OR5L1Q8NGL2 311 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 OR13G1Q8NGZ3 307 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 ITLN1Q8WWA0 313 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 ZDHHC16Q969W1 377 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 BPIFA2Q96DR5 249 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 POLE4Q9NR33 117 aa14.68□□□□□ -0.06
EXOSC3-202ENST00000396521 A0A1W2PPL8 197 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 SRRM5B3KS81 715 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 M0QZ24 198 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 TIMM23O14925 209 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 SGCEO43556 437 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 IGHV4-38-2P0DP08 117 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 HTR5AP47898 357 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 RGS6P49758 472 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 CTXN1P60606 82 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 TOP3AQ13472 1001 aaPredicted RBP14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 SELPLGQ14242 412 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 ERICH5Q6P6B1 374 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 Q6ZR03 302 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 ATG16L2Q8NAA4 619 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 RASD2Q96D21 266 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 NEIL1Q96FI4 390 aaPredicted RBP14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 TMEM165Q9HC07 324 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 MRGBPQ9NV56 204 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 KIF17Q9P2E2 1029 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 ATPIF1Q9UII2 106 aa14.67□□□□□ -0.06
EXOSC3-202ENST00000396521 DOK2O60496 412 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 NDUFA7O95182 113 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 NPPAP01160 153 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 SLC9A3P48764 834 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 MMP16P51512 607 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 CRYBA2P53672 197 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 PDCD1Q15116 288 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 KLBQ86Z14 1044 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 FAM156AQ8NDB6 213 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 OR8B3Q8NGG8 313 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 DACT3Q96B18 629 aaPredicted RBP14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 FAM71F1Q96KD3 344 aaPredicted RBP14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 OR8B2Q96RD0 313 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 ECSITQ9BQ95 431 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 SLC30A2Q9BRI3 323 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 NDEL1Q9GZM8 345 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 MMP27Q9H306 513 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 INTS9Q9NV88 658 aaKnown RBP14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 STARD10Q9Y365 291 aa14.66□□□□□ -0.06
EXOSC3-202ENST00000396521 TANC2Q9HCD6 1990 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 HOXA3O43365 443 aaPredicted RBP14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 GPANK1O95872 356 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 IFI30P13284 250 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 GZMMP51124 257 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 AQP6Q13520 282 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 GPR157Q5UAW9 335 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 FBXW12Q6X9E4 464 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 VASH1Q7L8A9 365 aaPredicted RBP14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 POU5F2Q8N7G0 328 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 OR8G5Q8NG78 346 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 WFDC12Q8WWY7 111 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 ERGIC1Q969X5 290 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 ZNF582Q96NG8 517 aaPredicted RBP14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 POMT1Q9Y6A1 747 aa14.65□□□□□ -0.06
EXOSC3-202ENST00000396521 TRAV40A0A0B4J280 105 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 FAM181BA6NEQ2 426 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 XKRYO14609 159 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 PHYHO14832 338 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 LIPFP07098 398 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 RAG2P55895 527 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 LSM6P62312 80 aaKnown RBP14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 METTL21CQ5VZV1 264 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 OLFML2AQ68BL7 652 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 NANOGP8Q6NSW7 305 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 OAFQ86UD1 273 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 RNF113BQ8IZP6 322 aaKnown RBP14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 LRRC75AQ8NAA5 344 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 OR8J3Q8NGG0 315 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 OR10S1Q8NGN2 331 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 MEGF10Q96KG7 1140 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 CITED1Q99966 193 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 GRHPRQ9UBQ7 328 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 CLN8Q9UBY8 286 aa14.64□□□□□ -0.07
EXOSC3-202ENST00000396521 CLPSL1A2RUU4 121 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 IRF2P14316 349 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 SELEP16581 610 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 PITPNBP48739 271 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 NPY4RP50391 375 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 ZNF404Q494X3 552 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 DCDC5Q6ZRR9 648 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 CALHM3Q86XJ0 350 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 CLDN22Q8N7P3 220 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 CELF2-AS1Q8N7Q2 184 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 LZICQ8WZA0 190 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 APOBEC3DQ96AK3 386 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 PRRC1Q96M27 445 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 CCT8L2Q96SF2 557 aa14.63□□□□□ -0.07
EXOSC3-202ENST00000396521 NUDT16L1Q9BRJ7 211 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms