RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 SPATS1Q496A3 300 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 UNQ6126/PRO20091Q6UXV3 157 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 DCDC5Q6ZRR9 648 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 SLC35D2Q76EJ3 337 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 ZER1Q7Z7L7 766 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 C10orf67Q8IYJ2 551 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 PAPD5Q8NDF8 572 aaKnown RBP11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 HIPK4Q8NE63 616 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 OR4F17Q8NGA8 305 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 MCHR2Q969V1 340 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 ZNF566Q969W8 418 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 NABP1Q96AH0 204 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 OR4F4Q96R69 305 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 SEMA6AQ9H2E6 1030 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 POFUT1Q9H488 388 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 SURF4O15260 269 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 GYG2O15488 501 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 FCN3O75636 299 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 MSX2P35548 267 aaPredicted RBP11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 PMELP40967 661 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 NPY4RP50391 375 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 PSG4Q00888 419 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 LRRC74AQ0VAA2 488 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 KLF10Q13118 480 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 RIPK1Q13546 671 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 CRIP3Q6Q6R5 217 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 NDUFA11Q86Y39 141 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 LRRC18Q8N456 261 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 AKR7LQ8NHP1 331 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 SLC7A6OSQ96CW6 309 aaPredicted RBP11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 R3HDM4Q96D70 268 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 OR52B2Q96RD2 323 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 MRPL13Q9BYD1 178 aaKnown RBP11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 SIAEQ9HAT2 523 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 BTNL2Q9UIR0 455 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 UGT2A1Q9Y4X1 527 aa11.22□□□□□ -0.61
VCPKMT-201ENST00000395859 SERPINI2O75830 405 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 NPPAP01160 153 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 FBP1P09467 338 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 NHLRC4P0CG21 123 aaPredicted RBP11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 S100A3P33764 101 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 CDKN2CP42773 168 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 GDI2P50395 445 aaKnown RBP11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 ERFP50548 548 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 ANXA11P50995 505 aaKnown RBP11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 CYLC2Q14093 348 aaPredicted RBP11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 SPANXN4Q5MJ08 99 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 C10orf128Q5T292 105 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 NXNQ6DKJ4 435 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 COMTD1Q86VU5 262 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 CALHM3Q86XJ0 350 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 TRIML2Q8N7C3 387 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 SPERTQ8NA61 448 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 SCCPDHQ8NBX0 429 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 OR5R1Q8NH85 324 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 SLC38A5Q8WUX1 472 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 DNAJA4Q8WW22 397 aaPredicted RBP11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 MEGF10Q96KG7 1140 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 PPP1R36Q96LQ0 422 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 PPA2Q9H2U2 334 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 EFCAB1Q9HAE3 211 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 SDR39U1Q9NRG7 319 aaPredicted RBP11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 TAS2R5Q9NYW4 299 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 PCDHGB5Q9Y5G0 923 aa11.21□□□□□ -0.61
VCPKMT-201ENST00000395859 CCDC154A6NI56 674 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 E9PBE3 544 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 OPN1SWP03999 348 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 CD28P10747 220 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 CRISP3P54108 245 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 MRPS34P82930 218 aaKnown RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 MELKQ14680 651 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 PDCD4Q53EL6 469 aaKnown RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 ALG10BQ5I7T1 473 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 RPS26P11Q5JNZ5 115 aaPredicted RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 METTL11BQ5VVY1 283 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 CD276Q5ZPR3 534 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 METAP1DQ6UB28 335 aaPredicted RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 C16orf89Q6UX73 402 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 HACD2Q6Y1H2 254 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 VASH1Q7L8A9 365 aaPredicted RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 OR5J2Q8NH18 312 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 NPRL2Q8WTW4 380 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 MCUR1Q96AQ8 359 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 NMD3Q96D46 503 aaKnown RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 C4orf45Q96LM5 186 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 ZNF347Q96SE7 839 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 WNT5BQ9H1J7 359 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 WDR55Q9H6Y2 383 aaPredicted RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 RANBP3Q9H6Z4 567 aaPredicted RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 ARL8BQ9NVJ2 186 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 CALML5Q9NZT1 146 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 ZIM2Q9NZV7 527 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 P2RX2Q9UBL9 471 aa11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 PRPF19Q9UMS4 504 aaKnown RBP11.2□□□□□ -0.62
VCPKMT-201ENST00000395859 A0A0B4J2E0 115 aa11.19□□□□□ -0.62
VCPKMT-201ENST00000395859 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms