RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 C1orf140Q5VVS0 124 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 KLHL24Q6TFL4 600 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC29A4Q7RTT9 530 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 SPAG16Q8N0X2 631 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 SHISA5Q8N114 240 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC22A24Q8N4F4 322 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 ZSCAN1Q8NBB4 408 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 TMEM185AQ8NFB2 350 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 PPP1R1CQ8WVI7 109 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 FBXW5Q969U6 566 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 MBD2Q9UBB5 411 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 FBLN5Q9UBX5 448 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 PURGQ9UJV8 347 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 GDF2Q9UK05 429 aaPredicted RBP9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 KCNK7Q9Y2U2 307 aa9.02□□□□□ -0.97
UBE2D3-208ENST00000394803 ARHGEF17Q96PE2 2063 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 LOC107986453A0A1B0GWG9 222 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 C9orf170A2RU37 121 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 TLCD2A6NGC4 264 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 B4DGG1 531 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 F5H0A9 414 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 NDUFA2O43678 99 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 SIGLEC6O43699 453 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ICOSLGO75144 302 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 STK17BO94768 372 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 PNPP00491 289 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 CHRM2P08172 466 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 THEGLP0DJG4 465 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC26A5P58743 744 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 PPIAP62937 165 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 INSM1Q01101 510 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 PLCXD2Q0VAA5 305 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ZP4Q12836 540 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 PABPC1L2AQ5JQF8 200 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 AWAT2Q6E213 333 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 OR2W3Q7Z3T1 314 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 TRAPPC6BQ86SZ2 158 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC22A18ASQ8N1D0 253 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ARL11Q969Q4 196 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 NARS2Q96I59 477 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 TSNAXQ99598 290 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC6A7Q99884 636 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 NMES1Q9C002 83 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 B3GNT4Q9C0J1 378 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 OR8D2Q9GZM6 311 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 MOB1AQ9H8S9 216 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 BARX1Q9HBU1 254 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 MRPL22Q9NWU5 206 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 CDH23Q9H251 3354 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 A0A0B4J2A0 478 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 TCRBV21S2A2A0A5A6 115 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 DCDC2BA2VCK2 349 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 DNASE2O00115 360 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 PLPP3O14495 311 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 NPIPB7O75200 414 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 SRSF10O75494 262 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ATG12O94817 140 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 DCNP07585 359 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 H2BFMP0C1H6 154 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 PET100P0DJ07 73 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 CASRP41180 1078 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 RPS27P42677 84 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 FNTBP49356 437 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 MFGE8Q08431 387 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 FZD2Q14332 565 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 INPP5JQ15735 1006 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 PCK2Q16822 640 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ZNF260Q3ZCT1 412 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ELP2Q6IA86 826 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 LRFN4Q6PJG9 635 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 BIVMQ86UB2 503 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 FJX1Q86VR8 437 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ZNF761Q86XN6 746 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 GKN2Q86XP6 184 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 RELL2Q8NC24 303 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 BPIFCQ8NFQ6 507 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 OR13C8Q8NGS7 320 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 RNF141Q8WVD5 230 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ADIPOR1Q96A54 375 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 GAL3ST4Q96RP7 486 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ELF4Q99607 663 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 MAP3K3Q99759 626 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 MS4A7Q9GZW8 240 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC39A1Q9NY26 324 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 SHPKQ9UHJ6 478 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 KLK13Q9UKR3 277 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 EMC9Q9Y3B6 208 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 ZNF175Q9Y473 711 aa9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 MRPS18BQ9Y676 258 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 COL5A1P20908 1838 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-208ENST00000394803 TMEM269A0A1B0GVZ9 245 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 RNF222A6NCQ9 220 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 NPIPA5E9PKD4 350 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 TSPAN2O60636 221 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 IGKV3-11P04433 115 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 FCER2P06734 321 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 GSTP1P09211 210 aaKnown RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 CTLA4P16410 223 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms