RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TMEM269A0A1B0GVZ9 245 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 IFITM5A6NNB3 132 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ZNF878C9JN71 531 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 AIPO00170 330 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 NPR2P20594 1047 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 MSR1P21757 451 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ARG2P78540 354 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 P2RY14Q15391 338 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ASPHD2Q6ICH7 369 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 IGFL2Q6UWQ7 119 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 FCRLAQ7L513 359 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 SAMD12Q8N8I0 201 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 POC5Q8NA72 575 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 OR5H6Q8NGV6 325 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 SP140LQ9H930 580 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 TCF7L1Q9HCS4 588 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ACKR4Q9NPB9 350 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 TBCCD1Q9NVR7 557 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 GTF2A1LQ9UNN4 478 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 POLR1DQ9Y2S0 133 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 V9GY05 133 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 PTTG1O95997 202 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 CSF3P09919 207 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 TNFSF10P50591 281 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 PSMD7P51665 324 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 CDC20Q12834 499 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ENDOGQ14249 297 aaKnown RBP13.21□□□□□ -0.29
CCT4-201ENST00000394440 ZNF766Q5HY98 468 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 OR8H2Q8N162 312 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 FDCSPQ8NFU4 85 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 OR2AJ1Q8NGZ0 328 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ASB5Q8WWX0 329 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ZNF416Q9BWM5 594 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 SLITRK2Q9H156 845 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 SPATA2Q9UM82 520 aa13.21□□□□□ -0.29
CCT4-201ENST00000394440 A0A0B4J203 849 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 SNRPBP14678 240 aaKnown RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 ACHEP22303 614 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 PPIAP62937 165 aaKnown RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 TSEN15Q8WW01 171 aaKnown RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 EXTL2Q9UBQ6 330 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 CSAG2Q9Y5P2 127 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 NCOR2Q9Y618 2525 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 IGKV3D-15A0A087WSY6 115 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 H3BSH0 61 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 RER1O15258 196 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 PSMA6P60900 246 aaKnown RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 HIST1H3AP68431 136 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 BCL2A1Q16548 175 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 HIST2H3PS2Q5TEC6 136 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 ZNF704Q6ZNC4 412 aaPredicted RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 HIST2H3AQ71DI3 136 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 TMEM178AQ8NBL3 297 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 SETD6Q8TBK2 473 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 ABHD3Q8WU67 409 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 TMEM45BQ96B21 275 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 ZNF775Q96BV0 537 aaPredicted RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 ZNF837Q96EG3 531 aaPredicted RBP13.2□□□□□ -0.3
CCT4-201ENST00000394440 KCNJ15Q99712 375 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 NIPAL2Q9H841 368 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 MALT1Q9UDY8 824 aa13.2□□□□□ -0.3
CCT4-201ENST00000394440 LOC107986453A0A1B0GWG9 222 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 A0A1W2PQ09 198 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 FAM25AB3EWG3 89 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 FAM25CB3EWG5 89 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 FAM25GB3EWG6 89 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 SLC43A1O75387 559 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 APOA1P02647 267 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 TTRP02766 147 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 ITGB2P05107 769 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 ADRB1P08588 477 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 UBCP0CG48 685 aaKnown RBP13.19□□□□□ -0.3
CCT4-201ENST00000394440 CFPP27918 469 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 MRPS34P82930 218 aaKnown RBP13.19□□□□□ -0.3
CCT4-201ENST00000394440 ZNF433Q8N7K0 673 aaPredicted RBP13.19□□□□□ -0.3
CCT4-201ENST00000394440 OR4M1Q8NGD0 313 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 DDX28Q9NUL7 540 aaKnown RBP13.19□□□□□ -0.3
CCT4-201ENST00000394440 HHLA2Q9UM44 414 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
CCT4-201ENST00000394440 TTLL8A6PVC2 850 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 FSTP19883 344 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 CCL11P51671 97 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 DEFA1P59665 94 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 DEFA3P59666 94 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 MADCAM1Q13477 382 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 IL18Q14116 193 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 SGCAQ16586 387 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 PYDC2Q56P42 97 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 RNFT1Q5M7Z0 435 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 BCL2L15Q5TBC7 163 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 TMEM244Q5VVB8 128 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 KLHL24Q6TFL4 600 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 AAED1Q7RTV5 226 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 ELMOD2Q8IZ81 293 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 LGALS14Q8TCE9 139 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms