RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C1QTNF3-AMACRE9PGA6 284 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 H3BSH0 61 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 DOK2O60496 412 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 AGR2O95994 175 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 OR8U9P0C7N5 309 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TACR3P29371 465 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 SULT1A1P50225 295 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 SULT1A2P50226 295 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TOMM20Q15388 145 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TMEM35AQ53FP2 167 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF574Q6ZN55 896 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 CD163Q86VB7 1156 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 FRMD1Q8N878 549 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 MCHR2Q969V1 340 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 MISP3Q96FF7 219 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 PLA2G2EQ9NZK7 142 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 KLHDC2Q9Y2U9 406 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 LOC100509620A0A075B734 347 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 A0A087X0M5 115 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 CXorf51AA0A1B0GTR3 108 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 A0A1B0GX30 115 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 FAM171A2A8MVW0 826 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 EFSO43281 561 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 DUS4LO95620 317 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 PLGP00747 810 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 DBIP07108 87 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 ADRB3P13945 408 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 NID1P14543 1247 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 RPS4Y1P22090 263 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 VAMP1P23763 118 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 PKIAP61925 76 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 CEBPEQ15744 281 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 LINC01590Q5TEZ4 76 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF627Q7L945 461 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 ZDHHC22Q8N966 263 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 PNLDC1Q8NA58 520 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 CCDC54Q8NEL0 328 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 OR4S1Q8NGB4 309 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 OR5K2Q8NHB8 316 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 PRRT1Q99946 306 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 PISDQ9UG56 409 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 CA14Q9ULX7 337 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 SPTBP11277 2137 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 TICRRQ7Z2Z1 1910 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 A0A1W2PPE2 198 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 A0A1W2PPV9 198 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 SLC17A2O00624 439 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 ERI3O43414 337 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 NDUFB2O95178 105 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 ABHD16AO95870 558 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 PRNPP04156 253 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 ERCC1P07992 297 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 SLC2A1P11166 492 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 CX3CR1P49238 355 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 GAMTQ14353 236 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 HNRNPA1L2Q32P51 320 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 LBHQ53QV2 105 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 DNLZQ5SXM8 178 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 EIF5AL1Q6IS14 154 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 FAM166AQ6J272 317 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 FAHD2BQ6P2I3 314 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 FAM220AQ7Z4H9 259 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 GKN2Q86XP6 184 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 ADAD2Q8NCV1 583 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 BHLHE23Q8NDY6 225 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 OR10D4PQ8NGN7 298 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 FAHD2AQ96GK7 314 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 YPEL4Q96NS1 127 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 LMF1Q96S06 567 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 TGIF2Q9GZN2 237 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 RXFP3Q9NSD7 469 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 KLK13Q9UKR3 277 aa13.2□□□□□ -0.3
VPS9D1-201ENST00000389386 NPIPA5A0A0B4J1W7 369 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 NPIPA7E9PJI5 369 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 H7C1Q1 480 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 DCTN6O00399 190 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 PEX12O00623 359 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 TCAPO15273 167 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 LATO43561 262 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF432O94892 652 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 NPIPA8P0DM63 369 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 LYL1P12980 280 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 NDUFA6P56556 154 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 CYCSP99999 105 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 MEF2DQ14814 521 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 SURF2Q15527 256 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 TCEA2Q15560 299 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 RAB30Q15771 203 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 HEPN1Q6WQI6 88 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF511Q8NB15 262 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 LYPD6BQ8NI32 183 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 GPR148Q8TDV2 347 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms