RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CCDC80Q76M96 950 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 RP9Q8TA86 221 aaKnown RBP13.45□□□□□ -0.26
VCX3A-201ENST00000381089 PLEKHA8Q96JA3 519 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 SSBP3Q9BWW4 388 aaPredicted RBP13.45□□□□□ -0.26
VCX3A-201ENST00000381089 HIF3AQ9Y2N7 669 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 GPANK1O95872 356 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 RPS2P15880 293 aaKnown RBP13.44□□□□□ -0.26
VCX3A-201ENST00000381089 KITLGP21583 273 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 SLC27A4Q6P1M0 643 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 C16orf87Q6PH81 154 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 C17orf107Q6ZR85 190 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 ITLN1Q8WWA0 313 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 TMIGD2Q96BF3 282 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 CMTM5Q96DZ9 223 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 OR2V2Q96R30 315 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 SH3GL1Q99961 368 aa13.44□□□□□ -0.26
VCX3A-201ENST00000381089 CEACAM18A8MTB9 384 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 TMEM178BH3BS89 294 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 DOK2O60496 412 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 KNG1P01042 644 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 CRYBA1P05813 215 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 MDKP21741 143 aaPredicted RBP13.43□□□□□ -0.26
VCX3A-201ENST00000381089 PRDX6P30041 224 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 CD80P33681 288 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 HTR5AP47898 357 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 NUDT2P50583 147 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 CTXN1P60606 82 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 GNB2P62879 340 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 PIN1Q13526 163 aaPredicted RBP13.43□□□□□ -0.26
VCX3A-201ENST00000381089 COQ5Q5HYK3 327 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 ZNF362Q5T0B9 420 aaPredicted RBP13.43□□□□□ -0.26
VCX3A-201ENST00000381089 FOXL2NBQ6ZUU3 175 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 PCYOX1LQ8NBM8 494 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 ZDHHC16Q969W1 377 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 UPRTQ96BW1 309 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 CMBLQ96DG6 245 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 BPIFA2Q96DR5 249 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 SIGLEC11Q96RL6 698 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 MIOXQ9UGB7 285 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 TAGLN3Q9UI15 199 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
VCX3A-201ENST00000381089 IGHV3OR16-10A0A075B7F0 116 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 TRAV40A0A0B4J280 105 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 A0A0G2JK05 382 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 FXYD1O00168 92 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 WNT2P09544 360 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 IGHV4-38-2P0DP08 117 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 IFI30P13284 250 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 ST3GAL3Q11203 375 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 ENDOGQ14249 297 aaKnown RBP13.42□□□□□ -0.26
VCX3A-201ENST00000381089 OCLNQ16625 522 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 ANKDD1AQ495B1 522 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 NLRC3Q7RTR2 1065 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 TRPM8Q7Z2W7 1104 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 CLDN22Q8N7P3 220 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 ATG16L2Q8NAA4 619 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 OR4F5Q8NH21 305 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 RAB40AQ8WXH6 277 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 PTP4A1Q93096 173 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 HAVCR1Q96D42 359 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 ECSITQ9BQ95 431 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 BEX1Q9HBH7 125 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 POLE4Q9NR33 117 aa13.42□□□□□ -0.26
VCX3A-201ENST00000381089 IGHV2-70DA0A0C4DH43 119 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 LRRC30A6NM36 301 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 SGCEO43556 437 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 PLATP00750 562 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 TNFRSF1BP20333 461 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 SRP9P49458 86 aaKnown RBP13.41□□□□□ -0.26
VCX3A-201ENST00000381089 MMP16P51512 607 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 BPIFB3P59826 476 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 HNRNPA0Q13151 305 aaKnown RBP13.41□□□□□ -0.26
VCX3A-201ENST00000381089 KRT72Q14CN4 511 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 ERICH5Q6P6B1 374 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 Q6ZR03 302 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 C1orf87Q8N0U7 546 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 OR8B3Q8NGG8 313 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 OR5L1Q8NGL2 311 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 NEIL1Q96FI4 390 aaPredicted RBP13.41□□□□□ -0.26
VCX3A-201ENST00000381089 OR8B2Q96RD0 313 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 GID8Q9NWU2 228 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 KIF17Q9P2E2 1029 aa13.41□□□□□ -0.26
VCX3A-201ENST00000381089 J3QW42 95 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 XKRYO14609 159 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 HOXA3O43365 443 aaPredicted RBP13.4□□□□□ -0.26
VCX3A-201ENST00000381089 PIP5K1CO60331 668 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 RAC2P15153 192 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 OMGP23515 440 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 OR1E2P47887 323 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 RGS6P49758 472 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 CRYBA2P53672 197 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 MXRA7P84157 204 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 RABL3Q5HYI8 236 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 C1orf94Q6P1W5 598 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 OAFQ86UD1 273 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 IGFN1Q86VF2 1251 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 KLBQ86Z14 1044 aa13.4□□□□□ -0.26
VCX3A-201ENST00000381089 OR13G1Q8NGZ3 307 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms