RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ZDBF2Q9HCK1 2354 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 CORO6Q6QEF8 472 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 CYYR1Q96J86 154 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC6A7Q99884 636 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 MICU1Q9BPX6 476 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 LDAHQ9H6V9 325 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 EPHA6Q9UF33 1036 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 FAM74A7A6NL05 159 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 H3BUI4 141 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 BGLAPP02818 100 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 HTR2CP28335 458 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 FAM74A3Q4VXF1 159 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 EMC4Q5J8M3 183 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 FAM122CQ6P4D5 195 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC29A4Q7RTT9 530 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 HSD17B13Q7Z5P4 300 aaPredicted RBP14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF679Q8IYX0 411 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 ADAMTS18Q8TE60 1221 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC25A44Q96H78 314 aaPredicted RBP14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC41A2Q96JW4 573 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 C1orf198Q9H425 327 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 EMC9Q9Y3B6 208 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 LRP12Q9Y561 859 aa14.57□□□□□ -0.08
NKX3-1-201ENST00000380871 PRSS37A4D1T9 235 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 C10orf142B7Z368 130 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 OR6A2O95222 327 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 HLA-DOBP13765 273 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 IL11P20809 199 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 DEFA5Q01523 94 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 EIF2B1Q14232 305 aaKnown RBP14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 WDFY1Q8IWB7 410 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 PXT1Q8NFP0 134 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 OR13C8Q8NGS7 320 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 ABHD6Q9BV23 337 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 A0A1W2PPC1 479 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 OR5H14A6NHG9 310 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 SHISA8B8ZZ34 492 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF735P0CB33 412 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 TAS2R19P59542 299 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 TAF13Q15543 124 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 TMPRSS9Q7Z410 1059 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 GVQW1Q8N7I0 195 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 GPR119Q8TDV5 335 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 RNF128Q8TEB7 428 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 C8orf44Q96CB5 159 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 VDAC3Q9Y277 283 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 WIPF3A6NGB9 483 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 AQP8O94778 261 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 HLA-AP01891 365 aaKnown RBP14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 SCAND1P57086 179 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 EBPQ15125 230 aaKnown RBP14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 MPPED2Q15777 294 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 OR52W1Q6IF63 320 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 LINC00346Q8IVM7 164 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 NPAS1Q99742 590 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 ADAM19Q9H013 955 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 PRMT8Q9NR22 394 aaPredicted RBP14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 VSIG4Q9Y279 399 aa14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 NOP16Q9Y3C1 178 aaKnown RBP14.56□□□□□ -0.08
NKX3-1-201ENST00000380871 GDF9O60383 454 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 EIF4E2O60573 245 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 PMS2P2O95744 297 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 AFF3P51826 1226 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ACTBP60709 375 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ACTG1P63261 375 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 PMPCAQ10713 525 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 TEX30Q5JUR7 227 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC18B1Q6NT16 456 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 C3orf33Q6P1S2 294 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 BPIFB2Q8N4F0 458 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 DAZLQ92904 295 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 FAM46BQ96A09 425 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ADIPOR1Q96A54 375 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 NARS2Q96I59 477 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF285Q96NJ3 590 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 PDCD10Q9BUL8 212 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 HRH3Q9Y5N1 445 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 FRYLO94915 3013 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 IGLV1-36A0A0B4J1U3 117 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 FAM25EA8MYX2 175 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 CYB5AP00167 134 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 GP1BBP13224 206 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ABCD3P28288 659 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 CXCL12P48061 93 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ATP1B3P54709 279 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 FMODQ06828 376 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ELAVL1Q15717 326 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 JMJD6Q6NYC1 403 aaPredicted RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC38A9Q8NBW4 561 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 OR4D6Q8NGJ1 314 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 PELOQ9BRX2 385 aaKnown RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 POTEKPQ9BYX7 375 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 BARX1Q9HBU1 254 aaPredicted RBP14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 PRDM6Q9NQX0 595 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 PLEKHA6Q9Y2H5 1048 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 COL6A3P12111 3177 aa14.55□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF736B4DX44 427 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 AKR1C2P52895 323 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 CAPZA1P52907 286 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 AKR1C1Q04828 323 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms