RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TPSD1Q9BZJ3 242 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 LAT2Q9GZY6 243 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 OR2AT4A6NND4 320 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 C17orf105B2RV13 164 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 GLCEO94923 617 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 SLC35E2P0CK97 266 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 MNDAP41218 407 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 F2RL1P55085 397 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 GFOD2Q3B7J2 385 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 KRBOX4Q5JUW0 171 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 EEF1A1P5Q5VTE0 462 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 TTLL10Q6ZVT0 673 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 LINC00346Q8IVM7 164 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 SLC35F3Q8IY50 421 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 GTPBP8Q8N3Z3 284 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 POMGNT2Q8NAT1 580 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 TSLPQ969D9 159 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 CYYR1Q96J86 154 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 SPACA5Q96QH8 159 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 NXF5Q9H1B4 397 aaKnown RBP11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 SFXN1Q9H9B4 322 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 UQCC1Q9NVA1 299 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 PCDHGA1Q9Y5H4 931 aa11.24□□□□□ -0.61
PRPF40B-202ENST00000380281 A0A087WUJ7 227 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 SLC16A7O60669 478 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 WNT11O96014 354 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 HNRNPA2B1P22626 353 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 CPT2P23786 658 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 ELAVL1Q15717 326 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 LINC01590Q5TEZ4 76 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 SKA3Q8IX90 412 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 OR10H5Q8NGA6 315 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 CMBLQ96DG6 245 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 TMEM41AQ96HV5 264 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 CHMP1AQ9HD42 196 aaPredicted RBP11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 CARHSP1Q9Y2V2 147 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 A0A0J9YY10 115 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 OR5H14A6NHG9 310 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 AGPAT2O15120 278 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 ITGA5P08648 1049 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 S1PR1P21453 382 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 MAPK3P27361 379 aaPredicted RBP11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 DLSTP36957 453 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 MAP3K8P41279 467 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 GFERP55789 205 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 ZP2Q05996 745 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 C3orf33Q6P1S2 294 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 DPY19L2P2Q6ZN68 376 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 ACBD4Q8NC06 268 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 OR51A2Q8NGJ7 313 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 OR2G2Q8NGZ5 317 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 VSTM2LQ96N03 204 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 TGIF2Q9GZN2 237 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 COMMD4Q9H0A8 199 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 PLEKHA1Q9HB21 404 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 GDE1Q9NZC3 331 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 PCDH15Q96QU1 1955 aa11.23□□□□□ -0.61
PRPF40B-202ENST00000380281 IGKV1D-42A0A075B6H8 117 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 A0A087WV62 115 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 CXorf65A6NEN9 183 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 A6NLC8 198 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 ACOT7O00154 380 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 CLDN4O14493 209 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 LMX1BO60663 402 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 AMY2AP04746 511 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 RNH1P13489 461 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 NME1P15531 152 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 LY6G6FQ5SQ64 297 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 OLFML2AQ68BL7 652 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 BAIAP2L2Q6UXY1 529 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 RHOUQ7L0Q8 258 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 SYS1Q8N2H4 156 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 HIST1H2BAQ96A08 127 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 C14orf144Q96I85 54 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 TCEAL7Q9BRU2 100 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 HRH4Q9H3N8 390 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 B9D1Q9UPM9 204 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 DMRT1Q9Y5R6 373 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 A0A0D9SG52 128 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 A0A1B0GTQ1 180 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 hCG_1809904A0A1W2PP81 198 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 A0A1W2PR64 198 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 A0A1W2PRV1 198 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 CPED1A4D0V7 1026 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 H0YIG0 161 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 XKRYO14609 159 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 BCL2L11O43521 198 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 CD14P08571 375 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 TACSTD2P09758 323 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 AVPR2P30518 371 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 C2orf76Q3KRA6 126 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 MESTQ5EB52 335 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 UNQ6494/PRO21346Q6UXR6 183 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 BEND4Q6ZU67 534 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 KCTD9Q7L273 389 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 TMEM200AQ86VY9 491 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms