RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TAAR9Q96RI9 348 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 MRPL13Q9BYD1 178 aaKnown RBP19.21■□□□□ 0.67
TRIM54-202ENST00000380075 ZNF700Q9H0M5 742 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 TAS2R8Q9NYW2 309 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 OR52A1Q9UKL2 312 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 HDGFL3Q9Y3E1 203 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 NCOR2Q9Y618 2525 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 A0A087WZY1 265 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 A0A1W2PQ72 361 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 C9orf172C9J069 976 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 UBCP0CG48 685 aaKnown RBP19.2■□□□□ 0.66
TRIM54-202ENST00000380075 ANXA3P12429 323 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 DCAF12Q5T6F0 453 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 OPN5Q6U736 354 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 GIMAP1Q8WWP7 306 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 RELTQ969Z4 430 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 FAM3DQ96BQ1 224 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 ZBTB8AQ96BR9 441 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 G6PC2Q9NQR9 355 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 PLSCR3Q9NRY6 295 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 KLK11Q9UBX7 282 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 ING4Q9UNL4 249 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 EMC9Q9Y3B6 208 aa19.2■□□□□ 0.66
TRIM54-202ENST00000380075 IGHV1-45A0A0A0MS14 117 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 SHISA8B8ZZ34 492 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 H0YC42 278 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 WNT11O96014 354 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 FAUP35544 74 aaKnown RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 POU3F4P49335 361 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 MMP16P51512 607 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 RTP5Q14D33 572 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 OR51D1Q8NGF3 324 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 M1APQ8TC57 530 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 PHF21AQ96BD5 680 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 RANBP3Q9H6Z4 567 aaPredicted RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 AKIRIN1Q9H9L7 192 aaPredicted RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 BOLA1Q9Y3E2 137 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 CHCHD2Q9Y6H1 151 aaPredicted RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 GGT3PA6NGU5 568 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 CTAG2O75638 210 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 IGHG1P01857 330 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 ITGA5P08648 1049 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 H2BFMP0C1H6 154 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 TCEA1P23193 301 aaKnown RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 RPS15P62841 145 aaKnown RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 FAM198BQ6UWH4 519 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 MDGA2Q7Z553 956 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 GCDHQ92947 438 aaPredicted RBP19.19■□□□□ 0.66
TRIM54-202ENST00000380075 FOXJ2Q9P0K8 574 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 FBXL3Q9UKT7 428 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 CELSR3Q9NYQ7 3312 aa19.19■□□□□ 0.66
TRIM54-202ENST00000380075 IGKV1D-43A0A0B4J1Z2 117 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 LOC102725191A0A1B0GVB3 256 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 A0A1B0GVI7 797 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 GMDSO60547 372 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 TGM6O95932 706 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 ZNF28P17035 718 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 CAPZA1P52907 286 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 NOXO1Q8NFA2 376 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 OR11H7Q8NGC8 314 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 OR13C3Q8NGS6 347 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 MR1Q95460 341 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 SLC25A44Q96H78 314 aaPredicted RBP19.18■□□□□ 0.66
TRIM54-202ENST00000380075 IMMP1LQ96LU5 166 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 DDA1Q9BW61 102 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 FBXL2Q9UKC9 423 aa19.18■□□□□ 0.66
TRIM54-202ENST00000380075 TMEM269A0A1B0GVZ9 245 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 H3BSH0 61 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 H7C417 338 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 RBBP9O75884 186 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 LAP3P28838 519 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 DNASE1L1P49184 302 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 P2RY4P51582 365 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 SSBP1Q04837 148 aaKnown RBP19.17■□□□□ 0.66
TRIM54-202ENST00000380075 C2orf76Q3KRA6 126 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 TMEM164Q5U3C3 297 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 ASPHD2Q6ICH7 369 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 LRFN4Q6PJG9 635 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 LUZP2Q86TE4 346 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 SLC7A5P1Q8MH63 180 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 NKAIN3Q8N8D7 197 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 WDSUB1Q8N9V3 476 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 OR11G2Q8NGC1 345 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 OR6M1Q8NGM8 313 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 OR1J4Q8NGS1 313 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 C11orf40Q8WZ69 217 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 PPP1R14AQ96A00 147 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 OXGR1Q96P68 337 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 ASCL3Q9NQ33 180 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 MRPL15Q9P015 296 aaKnown RBP19.17■□□□□ 0.66
TRIM54-202ENST00000380075 MTFP1Q9UDX5 166 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 FRYQ5TBA9 3013 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 CEP295Q9C0D2 2601 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 A0A1B0GUH1 482 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 LOC107986453A0A1B0GWG9 222 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 UMODP07911 640 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 CLRN1P58418 232 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 METTL11BQ5VVY1 283 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 SFRP4Q6FHJ7 346 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms