RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TSNAXQ99598 290 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 PSD2Q9BQI7 771 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 RBFOX1Q9NWB1 397 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 IMPA2O14732 288 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 TFP02787 698 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 RAF1P04049 648 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 EGR3Q06889 387 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 PRSS45Q7RTY3 260 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 SLC22A24Q8N4F4 322 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 OR6M1Q8NGM8 313 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 NINJ1Q92982 152 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 PELI1Q96FA3 418 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 MED30Q96HR3 178 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 AICDAQ9GZX7 198 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 MRPS28Q9Y2Q9 187 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 B4DXG7 233 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 RP2O75695 350 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ELK1P19419 428 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ACAA2P42765 397 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 GRB2P62993 217 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 FZD5Q13467 585 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 SSX1Q16384 188 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 KANSL1Q7Z3B3 1105 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 PXKQ7Z7A4 578 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 OR6F1Q8NGZ6 308 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF721Q8TF20 911 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 CT55Q8WUE5 264 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 HEATR5BQ9P2D3 2071 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 DIRAS3O95661 229 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 GPANK1O95872 356 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 KNG1P01042 644 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 SKP2Q13309 424 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 OR1C1Q15619 314 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 PTP4A1Q93096 173 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 PIGTQ969N2 578 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 NUBP2Q9Y5Y2 271 aa12.77□□□□□ -0.36
SHROOM1-203ENST00000378679 NOTCH4Q99466 2003 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 KANTRA0A1W2PQU2 76 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 H3BUI4 141 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 ACHEP22303 614 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 CDAP32320 146 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 CX3CR1P49238 355 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 ANGPTL5Q86XS5 388 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 CLDN23Q96B33 292 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 ALKBH3Q96Q83 286 aaPredicted RBP12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 STEAP1Q9UHE8 339 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 GLS2Q9UI32 602 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 EDARQ9UNE0 448 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 COPS3Q9UNS2 423 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 A0A0B4J203 849 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 GUSBP08236 651 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 SLC25A1P53007 311 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 INSL4Q14641 139 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 CLPPQ16740 277 aaPredicted RBP12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 ESCO2Q56NI9 601 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 C11orf40Q8WZ69 217 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 SPACA5Q96QH8 159 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 SLC5A7Q9GZV3 580 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 TAS2R4Q9NYW5 299 aa12.77□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF705EA8MWA4 302 aaPredicted RBP12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ITGB2P05107 769 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF35P13682 527 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 COL4A6Q14031 1691 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 LAIR1Q6GTX8 287 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 OR2V1Q8NHB1 315 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 OTOSQ8NHW6 89 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 C7orf50Q9BRJ6 194 aaKnown RBP12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ZFP64Q9NPA5 681 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 LANCL2Q9NS86 450 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 BHLHE40O14503 412 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 GNRHRP30968 328 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 DDOSTP39656 456 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 CLDN6P56747 220 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 FXYD4P59646 89 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 VAMP2P63027 116 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 METTL11BQ5VVY1 283 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF585AQ6P3V2 769 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 BEST3Q8N1M1 668 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 FAM71CQ8NEG0 241 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 NOX3Q9HBY0 568 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 PCDHGA5Q9Y5G8 931 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ICE1Q9Y2F5 2266 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 MN1Q10571 1320 aaPredicted RBP12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 A0A096LPE4 126 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 A0A1W2PPZ6 126 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 A0A1W2PQD3 144 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 EEF1E1-BLOC1S5C9J1V9 151 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 M0R135 149 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 SIX6O95475 246 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF44P15621 663 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 OR11G2Q8NGC1 345 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms