RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 OR1N2Q8NGR9 330 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 MIEN1Q9BRT3 115 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 MOB4Q9Y3A3 225 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 KIF26BQ2KJY2 2108 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 CTSSP25774 331 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ITGB7P26010 798 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 SEMA3BQ13214 749 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TCEAL1Q15170 157 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 FAM26DQ5JW98 314 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 SAXO2Q658L1 398 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 PWWP2BQ6NUJ5 590 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TMEM81Q6P7N7 255 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 DRAM2Q6UX65 266 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 DOLPP1Q86YN1 238 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 SLCO4A1Q96BD0 722 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 SLC25A33Q9BSK2 321 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TEX101Q9BY14 249 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TMED3Q9Y3Q3 217 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 NPIPB15A6NHN6 443 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 HSPB2A8KAH6 182 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 OPN1LWP04000 364 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 DSC1Q08554 894 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TSPAN31Q12999 210 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 HSPB2Q16082 182 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 PRICKLE2Q7Z3G6 844 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 GKN2Q86XP6 184 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 OR52I1Q8NGK6 324 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 GPR137Q96N19 417 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 P2RX7Q99572 595 aaKnown RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 RSRP1Q9BUV0 290 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 CHRNA10Q9GZZ6 450 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 KCNK12Q9HB15 430 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 FOXJ2Q9P0K8 574 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 FBXO4Q9UKT5 387 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TRAPPC4Q9Y296 219 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 CHST2Q9Y4C5 530 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 HSD17B6O14756 317 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 FAM109BQ6ICB4 259 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 IRF2BP1Q8IU81 584 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 PNPLA1Q8N8W4 532 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 THAP3Q8WTV1 239 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 ADTRPQ96IZ2 230 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TBX15Q96SF7 602 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ASIC5Q9NY37 505 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ADAMTS12P58397 1594 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TMEM129A0AVI4 362 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SLC35E2P0CK97 266 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 FUT1P19526 365 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 CASP6P55212 293 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 MS4A13Q5J8X5 152 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 NCMAPQ5T1S8 102 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 WBP2NLQ6ICG8 309 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ABCA7Q8IZY2 2146 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SPICQ8N5J4 248 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ADAT1Q9BUB4 502 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 NAA60Q9H7X0 242 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 COX7A2P2O60397 106 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SPANXN5Q5MJ07 72 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 TPRG1Q6ZUI0 275 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 DHRS4Q9BTZ2 278 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 FCF1Q9Y324 198 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 ADGRB1O14514 1584 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 CHD1O14646 1710 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ZNF732B4DXR9 585 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 VNN1O95497 513 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 HOXB1P14653 301 aaPredicted RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 RPA2P15927 270 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SLC25A11Q02978 314 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 OR2W3Q7Z3T1 314 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 CDRT4Q8N9R6 151 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ORAI2Q96SN7 254 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 MRPL37Q9BZE1 423 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 OR52D1Q9H346 318 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 LMO7Q8WWI1 1683 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 M0QYG6 137 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ARNTLO00327 626 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SIGLEC5O15389 551 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 DNAL4O96015 105 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ACRV1P26436 265 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 RHOBP62745 196 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 FAM209AQ5JX71 171 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SAMD7Q7Z3H4 446 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 BVESQ8NE79 360 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 NDRG1Q92597 394 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 BARHL1Q9BZE3 327 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 LSM2Q9Y333 95 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 FZD9O00144 591 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 HPP00738 406 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 FCGR2AP12318 317 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 COMPP49747 757 aaPredicted RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 SH3BP2P78314 561 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 PIP5KL1Q5T9C9 394 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 CYB561A3Q8NBI2 242 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 OR2A5Q96R48 311 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ZNF2Q9BSG1 426 aaPredicted RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 GNB4Q9HAV0 340 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 PRAMEF25A6NGN4 478 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms