RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TACR3P29371 465 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 PPM1FP49593 454 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SRSF3P84103 164 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 INPP5JQ15735 1006 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 RAB11BQ15907 218 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 AVPI1Q5T686 147 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 TMEM184AQ6ZMB5 413 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ZNF627Q7L945 461 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 NXF5Q9H1B4 397 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ZFP57Q9NU63 452 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 PRODH2Q9UF12 536 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 EDARQ9UNE0 448 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SLCO1B1Q9Y6L6 691 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 LOC100289279A0A1B0GTE1 492 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 SULT2B1O00204 365 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 SNAPINO95295 136 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 IFNA4P05014 189 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 LIPCP11150 499 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 MRPS21P82921 87 aaKnown RBP14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 SGCAQ16586 387 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 ZNF813Q6ZN06 617 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 DBX2Q6ZNG2 339 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 NDUFAF7Q7L592 441 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 PRR22Q8IZ63 422 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 NANPQ8TBE9 248 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 SGK3Q96BR1 496 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 NKX3-1Q99801 234 aaPredicted RBP14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 MYOZ1Q9NP98 299 aaPredicted RBP14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 PNO1Q9NRX1 252 aaKnown RBP14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 MBD2Q9UBB5 411 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 TMEM212A6NML5 194 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 C17orf51A8MQB3 221 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 ST8SIA5O15466 376 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 RAD1O60671 282 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 ALOX12BO75342 701 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 UTS2O95399 124 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 TXNDC12O95881 172 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 NPBWR1P48145 328 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 PRKXP51817 358 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 C10orf91Q5T1B1 145 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 C3orf33Q6P1S2 294 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 TSEN15Q8WW01 171 aaKnown RBP14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 MCHR2Q969V1 340 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 CNTNAP3BQ96NU0 1288 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 ADOQ96SZ5 270 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 RTN4RQ9BZR6 473 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 KCNG2Q9UJ96 466 aa14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 CARHSP1Q9Y2V2 147 aaKnown RBP14.93□□□□□ -0.02
PCDHA1-201ENST00000378133 C11orf98E9PRG8 122 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 EIF3GO75821 320 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 RENP00797 406 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 NR0B1P51843 470 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 HSD17B7P56937 341 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 DMWDQ09019 674 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 PDZK1IP1Q13113 114 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 Q3ZCU0 254 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 PRAMEF17Q5VTA0 474 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 C1QL3Q5VWW1 255 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 BPIFB2Q8N4F0 458 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 RXFP4Q8TDU9 374 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 RELTQ969Z4 430 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 CCNL2Q96S94 520 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 INTS14Q96SY0 518 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 TREM1Q9NP99 234 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 LHX6Q9UPM6 363 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 FGF16O43320 207 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 KCNAB3O43448 404 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 CYB5AP00167 134 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 CSN2P05814 226 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 DRD1P21728 446 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 CCKBRP32239 447 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 ARL11Q969Q4 196 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 GSN-AS1Q9NRJ2 163 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 CLEC1BQ9P126 229 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 RP1P56715 2156 aa14.92□□□□□ -0.02
PCDHA1-201ENST00000378133 TRBV23-1A0A0A0MS06 115 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 TMEM200CA6NKL6 621 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 ZNF736B4DX44 427 aaPredicted RBP14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 SULT1C2O00338 296 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 HLA-DQA2P01906 255 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 KIR3DL2P43630 455 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 PLEKHN1Q494U1 663 aaPredicted RBP14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 EMC4Q5J8M3 183 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 WDR38Q5JTN6 314 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 EEF1A1P5Q5VTE0 462 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 SLC35D2Q76EJ3 337 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 OR5AP2Q8NGF4 316 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 PTPMT1Q8WUK0 201 aaPredicted RBP14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 PPP1R14AQ96A00 147 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 OR8D2Q9GZM6 311 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 S1PR5Q9H228 398 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 TMEM231Q9H6L2 316 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 SLC17A5Q9NRA2 495 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 PCNX3Q9H6A9 2034 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 BLACEA4D250 179 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 SLC17A2O00624 439 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 IL33O95760 270 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 PNLIPRP2P54317 469 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 SLC37A1P57057 533 aa14.91□□□□□ -0.02
PCDHA1-201ENST00000378133 EGR3Q06889 387 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms