RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CLDN23Q96B33 292 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 PRSS27Q9BQR3 290 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF471Q9BX82 626 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-202ENST00000377797 C12orf4Q9NQ89 552 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 FAM86C1Q9NVL1 165 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 PIGLQ9Y2B2 252 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 DVL2O14641 736 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 GUSBP08236 651 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 CASP3P42574 277 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 FAPQ12884 760 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 STAC2Q6ZMT1 411 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 TRAPPC6BQ86SZ2 158 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 IQCF2Q8IXL9 164 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 FAM173AQ9BQD7 235 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 GLTPQ9NZD2 209 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 PCDHGA5Q9Y5G8 931 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 PCDHGA1Q9Y5H4 931 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 PLPP3O14495 311 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 CTLA4P16410 223 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 AIMP2Q13155 320 aaKnown RBP13.05□□□□□ -0.32
TCOF1-202ENST00000377797 DOC2BQ14184 412 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 GLIPR1L1Q6UWM5 242 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 STX12Q86Y82 276 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 FAM71CQ8NEG0 241 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 MUCL1Q96DR8 90 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 DERL3Q96Q80 235 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 SPACA5Q96QH8 159 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 OCEL1Q9H607 264 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 ZFP64Q9NPA5 681 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 SLC22A23A1A5C7 686 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 I3L521 148 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 ZFPL1O95159 310 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 OXA1LQ15070 435 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 ADGRG3Q86Y34 549 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 NOXO1Q8NFA2 376 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 LIPHQ8WWY8 451 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 LRRC46Q96FV0 321 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 E9PI62 339 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 TRAPPC2LH3BP13 241 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 TFP02787 698 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF585AQ6P3V2 769 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 CFAP77Q6ZQR2 320 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 SNAPC3Q92966 411 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 JAM3Q9BX67 310 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 OBP2BQ9NPH6 170 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 KCNE5Q9UJ90 142 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 WASF3Q9UPY6 502 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 A0A096LPE4 126 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 A0A1W2PPZ6 126 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 PLPP2O43688 288 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 CALCBP10092 127 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 PTBP1P26599 531 aaKnown RBP eCLIP13.04□□□□□ -0.32
TCOF1-202ENST00000377797 GRK1Q15835 563 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 EIF5AL1Q6IS14 154 aaKnown RBP13.04□□□□□ -0.32
TCOF1-202ENST00000377797 MOB1AQ9H8S9 216 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 WDR54Q9H977 334 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 MGAT4AQ9UM21 535 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 TIMM10BQ9Y5J6 103 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 DOCK8Q8NF50 2099 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 B4GALT1P15291 398 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 GPR176Q14439 515 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 SLC25A35Q3KQZ1 300 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 C3P1Q6ZMU1 363 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 C17orf47Q8NEP4 570 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 OR11G2Q8NGC1 345 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 NTMQ9P121 344 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 RAB22AQ9UL26 194 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 FITM1A5D6W6 292 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 B4DXG7 233 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 SC5DO75845 299 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 EPXP11678 715 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-202ENST00000377797 EFNA3P52797 238 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 CRYBA2P53672 197 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 SEC61A1P61619 476 aaKnown RBP13.04□□□□□ -0.32
TCOF1-202ENST00000377797 TNK1Q13470 666 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 CEBPEQ15744 281 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 GPR155Q7Z3F1 870 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 CMSS1Q9BQ75 279 aaKnown RBP13.04□□□□□ -0.32
TCOF1-202ENST00000377797 SYT3Q9BQG1 590 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-202ENST00000377797 LRP12Q9Y561 859 aa13.04□□□□□ -0.32
TCOF1-202ENST00000377797 TCRBP04435 133 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 SRP9P49458 86 aaKnown RBP13.03□□□□□ -0.32
TCOF1-202ENST00000377797 RGS19P49795 217 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 PMPCAQ10713 525 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 FHL5Q5TD97 284 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 NPEPL1Q8NDH3 523 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 BHLHE23Q8NDY6 225 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 OR1M1Q8NGA1 313 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 OR6F1Q8NGZ6 308 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 M1APQ8TC57 530 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 TXNDC15Q96J42 360 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 PHB2Q99623 299 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 MICU1Q9BPX6 476 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 PBOV1Q9GZY1 135 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 KCNIP1Q9NZI2 227 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 HEATR5BQ9P2D3 2071 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 OR2M5A3KFT3 312 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 H7C417 338 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms