RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CCL8P80075 99 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 GK3PQ14409 553 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 DNAL1Q4LDG9 190 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 FAM209AQ5JX71 171 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 CLEC12AQ5QGZ9 265 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 OR2T5Q6IEZ7 315 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 PRIMA1Q86XR5 153 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 SDR9C7Q8NEX9 313 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 GJC3Q8NFK1 279 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 OR2T29Q8NH02 315 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 OR1F12Q8NHA8 337 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 MSI2Q96DH6 328 aaKnown RBP14.36□□□□□ -0.11
HMGN4-201ENST00000377575 COG8Q96MW5 612 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 TSSK2Q96PF2 358 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 THTPAQ9BU02 230 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 EGLN3Q9H6Z9 239 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 SAP30LQ9HAJ7 183 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 RPRD1BQ9NQG5 326 aaKnown RBP14.36□□□□□ -0.11
HMGN4-201ENST00000377575 ZNF275Q9NSD4 429 aaPredicted RBP14.36□□□□□ -0.11
HMGN4-201ENST00000377575 B9D1Q9UPM9 204 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 OR6C6A6NF89 314 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 J3QW42 95 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 DCTN6O00399 190 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 LMX1BO60663 402 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 NGFP01138 241 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 HOXB6P17509 224 aaKnown RBP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 COL8A2P25067 703 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 TMEM33P57088 247 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 TRAP1Q12931 704 aaKnown RBP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 TRIP10Q15642 601 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 SLC36A3Q495N2 470 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 ZNF770Q6IQ21 691 aaPredicted RBP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 RASSF6Q6ZTQ3 369 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 ZBTB46Q86UZ6 589 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 OR6V1Q8N148 313 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 AQP11Q8NBQ7 271 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 OR52E2Q8NGJ4 325 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 GTF3AQ92664 365 aaKnown RBP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 YIPF5Q969M3 257 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 CLPTM1LQ96KA5 538 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 DCLRE1CQ96SD1 692 aaKnown RBP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 HDHD2Q9H0R4 259 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 SRA1Q9HD15 236 aaKnown RBP14.35□□□□□ -0.11
HMGN4-201ENST00000377575 TBC1D23Q9NUY8 699 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 GRIP1Q9Y3R0 1128 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 U3KQV3 271 aa14.35□□□□□ -0.11
HMGN4-201ENST00000377575 RER1O15258 196 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 PPIHO43447 177 aaKnown RBP14.34□□□□□ -0.11
HMGN4-201ENST00000377575 TIMM8AO60220 97 aaPredicted RBP14.34□□□□□ -0.11
HMGN4-201ENST00000377575 RP2O75695 350 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 GPANK1O95872 356 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 RGS6P49758 472 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 MMP15P51511 669 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 COX10Q12887 443 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 TSTQ16762 297 aaKnown RBP14.34□□□□□ -0.11
HMGN4-201ENST00000377575 MEP1BQ16820 701 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 MICAQ29983 383 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 CCDC92Q53HC0 331 aaPredicted RBP14.34□□□□□ -0.11
HMGN4-201ENST00000377575 SLC35F1Q5T1Q4 408 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 OTPQ5XKR4 325 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 SLC26A10Q8NG04 563 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 DIRC2Q96SL1 478 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 COQ7Q99807 217 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 BEX2Q9BXY8 128 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 EGLN1Q9GZT9 426 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 SHARPINQ9H0F6 387 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 IL20Q9NYY1 176 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 ZDHHC8Q9ULC8 765 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 LHFPL6Q9Y693 200 aa14.34□□□□□ -0.11
HMGN4-201ENST00000377575 IGHV1-69-2A0A0G2JMI3 117 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 OR6C68A6NDL8 312 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 AQP12BA6NM10 295 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 BHLHE40O14503 412 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 ACOT8O14734 319 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 GYG2O15488 501 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 SPRY3O43610 288 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 UBOX5O94941 541 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 TGFAP01135 160 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 GASTP01350 101 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 IFNA2P01563 188 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 IGHV1-46P01743 117 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 HLA-DQA2P01906 255 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 HNF1AP20823 631 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 CCNIQ14094 377 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 USP51Q70EK9 711 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 AQP12AQ8IXF9 295 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 LINC01356Q8N9X3 169 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 ELMOD3Q96FG2 381 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 CDADC1Q9BWV3 514 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 DGCR6LQ9BY27 220 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 PLA2G12AQ9BZM1 189 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 FN3KQ9H479 309 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 VNN3Q9NY84 501 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 KCNG2Q9UJ96 466 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 BAIAP2Q9UQB8 552 aa14.33□□□□□ -0.12
HMGN4-201ENST00000377575 DHRS12A0PJE2 317 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 ZSCAN5BA6NJL1 495 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 CDC14BO60729 498 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms