RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RASL10BQ96S79 203 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 TMEM43Q9BTV4 400 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 DICER1Q9UPY3 1922 aaKnown RBP16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 LOC100289279A0A1B0GTE1 492 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 F5H5P2 479 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 SPDEFO95238 335 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 IL2RGP31785 369 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 HOXD12P35452 270 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 GZMMP51124 257 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 ZNF695Q8IW36 515 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 ABHD5Q8WTS1 349 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 ATF6BQ99941 703 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 GDF2Q9UK05 429 aaPredicted RBP16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 GLI4P10075 376 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 DSCR4P56555 118 aaPredicted RBP16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 ZNF141Q15928 474 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 C3P1Q6ZMU1 363 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 NOXA1Q86UR1 476 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 STX12Q86Y82 276 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 CARFQ8N187 725 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 OR56B4Q8NH76 319 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 PPA2Q9H2U2 334 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 METTL17Q9H7H0 456 aaPredicted RBP16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 TMEM74BQ9NUR3 256 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 TAS2R3Q9NYW6 316 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 TCRBP04435 133 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 STEAP1BQ6NZ63 245 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 SEMA6DQ8NFY4 1073 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 SLC52A3Q9NQ40 469 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 GREB1Q4ZG55 1949 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 SMCO3A2RU48 225 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 C5orf49A4QMS7 147 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 MCRIP1C9JLW8 97 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 DLX5P56178 289 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 OR2Y1Q8NGV0 311 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 TXNDC15Q96J42 360 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 MFFQ9GZY8 342 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 A3GALT2U3KPV4 340 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 TMEM82A0PJX8 343 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 C4orf51C9J302 202 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 DPM1O60762 260 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 ACHEP22303 614 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 SUMO3P55854 103 aaPredicted RBP16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 DGCR2P98153 550 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 ZXDAP98168 799 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 SPINK14Q6IE38 97 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 OR52I2Q8NH67 350 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 C7orf50Q9BRJ6 194 aaKnown RBP16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 LHX6Q9UPM6 363 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 BORCS7-ASMTA0A0B4J1R7 106 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 TMEM235A6NFC5 223 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 PRAF2O60831 178 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 CPT2P23786 658 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 AGTR1P30556 359 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 ZMYND11Q15326 602 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 ZNF764Q96H86 408 aaPredicted RBP16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 UFSP2Q9NUQ7 469 aa16.19■□□□□ 0.18
PTPDC1-202ENST00000375360 EFSO43281 561 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 TK1P04183 234 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 TIGD3Q6B0B8 471 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ADGRE4PQ86SQ3 457 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 GCNT2Q8N0V5 402 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 OR2V1Q8NHB1 315 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 UBQLN2Q9UHD9 624 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 BOLA1Q9Y3E2 137 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 TIMM10BQ9Y5J6 103 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 PEX14O75381 377 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 NXPH2O95156 264 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ERGP11308 486 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 MVDP53602 400 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 FGL1Q08830 312 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ETFDHQ16134 617 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 SLC25A35Q3KQZ1 300 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 FAM76BQ5HYJ3 339 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 DCUN1D4Q92564 292 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 TRAPPC2LQ9UL33 140 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ARPC3O15145 178 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 PRICKLE3O43900 615 aaPredicted RBP16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ZNF254O75437 659 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 FAM157BP0CG42 384 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 TNFSF4P23510 183 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 HTR2BP41595 481 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ZNF616Q08AN1 781 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 FUT7Q11130 342 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 EIF3IQ13347 325 aaKnown RBP16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ZNF709Q8N972 641 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 SCGB1C1Q8TD33 95 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 PELI1Q96FA3 418 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 LRFN5Q96NI6 719 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 GPA33Q99795 319 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 ZNF768Q9H5H4 540 aaKnown RBP16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 TCFL5Q9UL49 500 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 TOX3O15405 576 aaPredicted RBP16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 DOK3Q7L591 496 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 COMTD1Q86VU5 262 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 CCDC71Q8IV32 467 aaPredicted RBP16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 CCDC71LQ8N9Z2 235 aa16.18■□□□□ 0.18
PTPDC1-202ENST00000375360 CDK2P24941 298 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms