RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ADAM5Q6NVV9 412 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 RNF113BQ8IZP6 322 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 ZNF567Q8N184 647 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 NOXO1Q8NFA2 376 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 ZNF354BQ96LW1 612 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 MBOAT4Q96T53 435 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 ZNF184Q99676 751 aaPredicted RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 DHX35Q9H5Z1 703 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 NMNAT1Q9HAN9 279 aaPredicted RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 RSL24D1Q9UHA3 163 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 JCHAINP01591 159 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CTBSQ01459 385 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 MAD2L1BPQ15013 274 aaPredicted RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 ZNF750Q32MQ0 723 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 POC1AQ8NBT0 407 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 TMEM163Q8TC26 289 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 FAM3CQ92520 227 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 PEX11GQ96HA9 241 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CAPNS2Q96L46 248 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 URM1Q9BTM9 101 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 ARL6Q9H0F7 186 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 THYN1Q9P016 225 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 SLC35A3Q9Y2D2 325 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 Q9Y3F1 56 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 TRAV8-7A0A075B6U6 113 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 A0A1W2PNR3 127 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 ARL5CA6NH57 179 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 XRCC3O43542 346 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 PLPP2O43688 288 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 C1QBP02746 253 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 BMP5P22003 454 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 CDKN2BP42772 138 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 EVX1P49640 407 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 CRISP1P54107 249 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 WNT3AP56704 352 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 DOC2BQ14184 412 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 CRMP1Q14194 572 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 TATDN3Q17R31 274 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 WDR74Q6RFH5 385 aaPredicted RBP8.05□□□□□ -1.12
UBR4-201ENST00000375218 RPTNQ6XPR3 784 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 H2BFWTQ7Z2G1 175 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 ISCA2Q86U28 154 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 FAM126BQ8IXS8 530 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 FUNDC2Q9BWH2 189 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 MARCH5Q9NX47 278 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 BFARQ9NZS9 450 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 KIF25Q9UIL4 384 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.05□□□□□ -1.12
UBR4-201ENST00000375218 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.05□□□□□ -1.12
UBR4-201ENST00000375218 HMX2A2RU54 273 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 LRP5LA4QPB2 252 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 FTCDNL1E5RQL4 147 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 CD74P04233 296 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 SLC6A1P30531 599 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 TIMM23BQ5SRD1 257 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 SYPL2Q5VXT5 272 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 IL17DQ8TAD2 202 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 MZB1Q8WU39 189 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 B3GNT3Q9Y2A9 372 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 ACTL7BQ9Y614 415 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 A0A1B0GW55 424 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 C1orf196B1AJZ1 125 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 DUX4L2P0CJ85 424 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 DUX4L3P0CJ86 424 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 DUX4L5P0CJ88 424 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 DUX4L6P0CJ89 424 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 DUX4L7P0CJ90 424 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 PAX9P55771 341 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 SRSF7Q16629 238 aaKnown RBP eCLIP8.05□□□□□ -1.12
UBR4-201ENST00000375218 LETMD1Q6P1Q0 360 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 DUX4L9Q6RFH8 374 aaPredicted RBP8.05□□□□□ -1.12
UBR4-201ENST00000375218 FAM183BPQ6ZVS7 135 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 TDHQ8IZJ6 230 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 RDH10Q8IZV5 341 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 TRMT61AQ96FX7 289 aaKnown RBP8.05□□□□□ -1.12
UBR4-201ENST00000375218 FAM49AQ9H0Q0 323 aaPredicted RBP8.05□□□□□ -1.12
UBR4-201ENST00000375218 DUX4Q9UBX2 424 aa8.05□□□□□ -1.12
UBR4-201ENST00000375218 MPZL1O95297 269 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 CHRM4P08173 479 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 FTH1P19P0C7X4 201 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 FUT3P21217 361 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ERVFRD-1P60508 538 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 SLC18A2Q05940 514 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 TMPRSS11AQ6ZMR5 421 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 TMPRSS11FQ6ZWK6 438 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 OR52N4Q8NGI2 321 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 OR6T1Q8NGN1 323 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 SEH1LQ96EE3 360 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 REEP6Q96HR9 211 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 HCAR1Q9BXC0 346 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 SPRTNQ9H040 489 aaPredicted RBP8.04□□□□□ -1.12
UBR4-201ENST00000375218 DENND4AQ7Z401 1863 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 C2CD4BA6NLJ0 364 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 H0YL77 283 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 CLIC1O00299 241 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ACOT8O14734 319 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 NARSO43776 548 aaKnown RBP8.04□□□□□ -1.12
UBR4-201ENST00000375218 C8GP07360 202 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 GABRA1P14867 456 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms