RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 SRRM5B3KS81 715 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 C11orf98E9PRG8 122 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 H0YHG0 523 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 H3BNX3 289 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 HOXA3O43365 443 aaPredicted RBP12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 TPST2O60704 377 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 FKBP6O75344 327 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 PLATP00750 562 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 MT-ND1P03886 318 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 HTR2AP28223 471 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 BPIFB3P59826 476 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 BTG1P62324 171 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 TNFAIP6P98066 277 aaPredicted RBP12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 PAX8Q06710 450 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 NPTX1Q15818 432 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 FAM98BQ52LJ0 330 aaKnown RBP12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 NHLRC1Q6VVB1 395 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 OR6T1Q8NGN1 323 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 UPRTQ96BW1 309 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 RBM4BQ9BQ04 359 aaKnown RBP12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 MAGIXQ9H6Y5 334 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 EVA1AQ9H8M9 152 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 S100A14Q9HCY8 104 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 CCNB1IP1Q9NPC3 277 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 NOX4Q9NPH5 578 aa12.49□□□□□ -0.41
CDKN1A-202ENST00000373711 SLC22A31A6NKX4 558 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 F5H0A9 414 aaPredicted RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 IGHG1P01857 330 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 IGHV4-38-2P0DP08 117 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 RAP2AP10114 183 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 STOMP27105 288 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 MDH2P40926 338 aaKnown RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 CLRN1P58418 232 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 SRSF4Q08170 494 aaKnown RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 HLXQ14774 488 aaPredicted RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 TAF9Q16594 264 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 THEM4Q5T1C6 240 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 WDR88Q6ZMY6 472 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 HDDC2Q7Z4H3 204 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 RANBP3LQ86VV4 465 aaPredicted RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 TSPYL5Q86VY4 417 aaPredicted RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 LRRC28Q86X40 367 aaPredicted RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 ZDHHC21Q8IVQ6 265 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 TMEM86BQ8N661 226 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 KLF14Q8TD94 323 aaPredicted RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 GEMIN6Q8WXD5 167 aaKnown RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 MARS2Q96GW9 593 aaKnown RBP12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 MOGAT1Q96PD6 335 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 CHID1Q9BWS9 393 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 AP4S1Q9Y587 144 aa12.48□□□□□ -0.41
CDKN1A-202ENST00000373711 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 A0A1B0GX12 115 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 J3KTA2 159 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 SURF4O15260 269 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 RNF13O43567 381 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 TIPRLO75663 272 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 DIRAS1O95057 198 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 QDPRP09417 244 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 FUT4P22083 530 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 MAGEA2P43356 314 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 YAP1P46937 504 aaKnown RBP12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 GDI2P50395 445 aaKnown RBP12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 ARHGDIAP52565 204 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 RGS8P57771 180 aaPredicted RBP12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 SPATA46Q5T0L3 261 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 FIP1L1Q6UN15 594 aaKnown RBP12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 C10orf67Q8IYJ2 551 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 ZNF283Q8N7M2 679 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 SLC25A40Q8TBP6 338 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 PLEKHA8Q96JA3 519 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 ELOVL3Q9HB03 270 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 ARMC1Q9NVT9 282 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 C1RLQ9NZP8 487 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 NDUFAF4Q9P032 175 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 KIF17Q9P2E2 1029 aa12.47□□□□□ -0.41
CDKN1A-202ENST00000373711 IGHV3OR16-10A0A075B7F0 116 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 CENPBD1B2RD01 187 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 IFNL4K9M1U5 179 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 FABP3P05413 133 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 MMP7P09237 267 aaPredicted RBP12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 PGA4P0DJD7 388 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 PGA3P0DJD8 388 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 CD80P33681 288 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 MPV17P39210 176 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 OR1Q1Q15612 314 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 PABPC1L2AQ5JQF8 200 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 GPR157Q5UAW9 335 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 ASPHD2Q6ICH7 369 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 ZFP1Q6P2D0 407 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 ARL9Q6T311 187 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 RHOUQ7L0Q8 258 aa12.46□□□□□ -0.41
CDKN1A-202ENST00000373711 LRRC18Q8N456 261 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms