RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 PIGMQ9H3S5 423 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 PNO1Q9NRX1 252 aaKnown RBP14.7□□□□□ -0.06
SDC4-201ENST00000372733 SZT2Q5T011 3432 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 LOC101059948A0A1B0GTJ6 334 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 CDC14CA4D256 554 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 OR2AT4A6NND4 320 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 NUDT14O95848 222 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 TNFP01375 233 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 ADCYAP1P18509 176 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 PRKXP51817 358 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 SLC25A42Q86VD7 318 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 FJX1Q86VR8 437 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 WNT2BQ93097 391 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 PHYHIPLQ96FC7 376 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 OR8D2Q9GZM6 311 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 EEF1E1-BLOC1S5C9J1V9 151 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 VAMP1P23763 118 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 AKT2P31751 481 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 RPL27P61353 136 aaKnown RBP14.69□□□□□ -0.06
SDC4-201ENST00000372733 SHEQ5VZ18 495 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 FAM109BQ6ICB4 259 aaPredicted RBP14.69□□□□□ -0.06
SDC4-201ENST00000372733 KCTD18Q6PI47 426 aaPredicted RBP14.69□□□□□ -0.06
SDC4-201ENST00000372733 KCTD9Q7L273 389 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 TRAPPC6BQ86SZ2 158 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 CCDC36Q8IYA8 594 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 NUDCD2Q8WVJ2 157 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 TRAV36DV7A0A075B6V5 113 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 KIR2DS5A0A0G2JLQ3 304 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 A0A0G2JNG1 304 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 C9orf170A2RU37 121 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 TMEM200CA6NKL6 621 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 B4DGG1 531 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 KIR2DS3K7RE56 304 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 FADS1O60427 444 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 NSA2O95478 260 aaKnown RBP14.69□□□□□ -0.06
SDC4-201ENST00000372733 FREM3P0C091 2139 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 CD96P40200 585 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 SLC37A1P57057 533 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 KIR2DS5Q14953 304 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 OR7A5Q15622 319 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 RAB12Q6IQ22 244 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 RTN4RL2Q86UN3 420 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 OR5T2Q8NGG2 359 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 S1PR5Q9H228 398 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 KIF26BQ2KJY2 2108 aa14.69□□□□□ -0.06
SDC4-201ENST00000372733 TMEM218A2RU14 115 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 IL13RA1P78552 427 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 INPP5JQ15735 1006 aaPredicted RBP14.68□□□□□ -0.06
SDC4-201ENST00000372733 MAMDC2Q7Z304 686 aaPredicted RBP14.68□□□□□ -0.06
SDC4-201ENST00000372733 LDLRAD3Q86YD5 345 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 CBLN2Q8IUK8 224 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 ADAD2Q8NCV1 583 aaKnown RBP14.68□□□□□ -0.06
SDC4-201ENST00000372733 OR52N5Q8NH56 324 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 THAP6Q8TBB0 222 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 PTPMT1Q8WUK0 201 aaPredicted RBP14.68□□□□□ -0.06
SDC4-201ENST00000372733 FAM46BQ96A09 425 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 MAP3K3Q99759 626 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 PRRT1Q99946 306 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 HHLA2Q9UM44 414 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 MAOBP27338 520 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 HSD17B7P56937 341 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 MEF2DQ14814 521 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 HFEQ30201 348 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 CHST4Q8NCG5 386 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 MITD1Q8WV92 249 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 AQP3Q92482 292 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 LAT2Q9GZY6 243 aa14.68□□□□□ -0.06
SDC4-201ENST00000372733 GDF2Q9UK05 429 aaPredicted RBP14.68□□□□□ -0.06
SDC4-201ENST00000372733 STK17BO94768 372 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 RPL35P42766 123 aaKnown RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 PPICP45877 212 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 AKR1D1P51857 326 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 YPEL5P62699 121 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 SGCBQ16585 318 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 LINC00346Q8IVM7 164 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 INO80EQ8NBZ0 244 aaPredicted RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 ZC3H10Q96K80 434 aaKnown RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 PHB2Q99623 299 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 FBRSQ9HAH7 460 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 SLC2A8Q9NY64 477 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 COA3Q9Y2R0 106 aaPredicted RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 KLF2Q9Y5W3 355 aaPredicted RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 ATG2AQ2TAZ0 1938 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 TDRD6O60522 2096 aaKnown RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 CPED1A4D0V7 1026 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 SRSF10O75494 262 aaKnown RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 ACTL6AO96019 429 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 IL2RAP01589 272 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 AKR1C4P17516 323 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 HAGHLQ6PII5 290 aaPredicted RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 UQCC3Q6UW78 93 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 TMPPEQ6ZT21 453 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 PAQR8Q8TEZ7 354 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 TSLPQ969D9 159 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 OR11A1Q9GZK7 315 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 VSX1Q9NZR4 365 aaPredicted RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 CYB5R1Q9UHQ9 305 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 ZNF107Q9UII5 783 aaPredicted RBP14.67□□□□□ -0.06
SDC4-201ENST00000372733 RHBDD3Q9Y3P4 386 aa14.67□□□□□ -0.06
SDC4-201ENST00000372733 R4GMQ9 66 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms