RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CDCA4Q9BXL8 241 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CHST8Q9H2A9 424 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 MROH1Q8NDA8 1641 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 PLP1P60201 277 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 UBE2MP61081 183 aaKnown RBP14.03□□□□□ -0.16
COL5A1-201ENST00000371817 MMP21Q8N119 569 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 LKAAEAR1Q8TD35 194 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CCNL2Q96S94 520 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-201ENST00000371817 PCYT2Q99447 389 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 PLIN4Q96Q06 1357 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 PXDNQ92626 1479 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 ZNF98A6NK75 572 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 LDB3O75112 727 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 GLIPR1L1Q6UWM5 242 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 OR2AE1Q8NHA4 323 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CLEC4DQ8WXI8 215 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 NIPSNAP1Q9BPW8 284 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 BARHL1Q9BZE3 327 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CACFD1Q9UGQ2 172 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 PAM16Q9Y3D7 125 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 A0A1W2PPH5 198 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 BLACEA4D250 179 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 CNIH1O95406 144 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 GJA4P35212 333 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 ADPRHL1Q8NDY3 354 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 B3GAT1Q9P2W7 334 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 FOXK2Q01167 660 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 SYT14P1Q58G82 188 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 IKZF5Q9H5V7 419 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 WNT6Q9Y6F9 365 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 CD200P41217 278 aa14.02□□□□□ -0.16
COL5A1-201ENST00000371817 OTUD1Q5VV17 481 aaPredicted RBP14.02□□□□□ -0.16
COL5A1-201ENST00000371817 ABCD3P28288 659 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 ISL1P61371 349 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 GLCCI1Q86VQ1 547 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 OR10G3Q8NGC4 313 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 HERPUD2Q9BSE4 406 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 EDEM2Q9BV94 578 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 DDNO94850 711 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-201ENST00000371817 TCTN2Q96GX1 697 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 ZFYVE21Q9BQ24 234 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF2Q9BSG1 426 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-201ENST00000371817 AKIRIN1Q9H9L7 192 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-201ENST00000371817 CBLCQ9ULV8 474 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 CNN1P51911 297 aaKnown RBP14.02□□□□□ -0.17
COL5A1-201ENST00000371817 PAX5Q02548 391 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 HIST3H3Q16695 136 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 EXD3Q8N9H8 876 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 LMO3Q8TAP4 145 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 ULBP3Q9BZM4 244 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 IGLON5A6NGN9 336 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 FAM155AB1AL88 458 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-201ENST00000371817 HEXAP06865 529 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 SNRPNP63162 240 aaKnown RBP14.02□□□□□ -0.17
COL5A1-201ENST00000371817 CSNK1G2P78368 415 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM241Q24JQ0 296 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 MFSD12Q6NUT3 480 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 SLC16A14Q7RTX9 510 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 RAB24Q969Q5 203 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 MCHR2Q969V1 340 aa14.02□□□□□ -0.17
COL5A1-201ENST00000371817 NSG1A0A0A6YYJ2 146 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 SUOXP51687 545 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 OR2W3Q7Z3T1 314 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 CSNK1G1Q9HCP0 422 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 PRSS16Q9NQE7 514 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 SCN5AQ14524 2016 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 FBLL1A6NHQ2 334 aaKnown RBP14.01□□□□□ -0.17
COL5A1-201ENST00000371817 LEUTXA8MZ59 168 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 P2RY10O00398 339 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 FZD6O60353 706 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 WASHC3Q9Y3C0 194 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 WSB1Q9Y6I7 421 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 SOCS7O14512 581 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF264O43296 627 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 COCHO43405 550 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 KIR2DL3P43628 341 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 SYPL1Q16563 259 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 DND1Q8IYX4 353 aaKnown RBP14.01□□□□□ -0.17
COL5A1-201ENST00000371817 SEC11CQ9BY50 192 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 WDR61Q9GZS3 305 aaKnown RBP14.01□□□□□ -0.17
COL5A1-201ENST00000371817 ING1Q9UK53 422 aaPredicted RBP14.01□□□□□ -0.17
COL5A1-201ENST00000371817 NOSIPQ9Y314 301 aaKnown RBP14.01□□□□□ -0.17
COL5A1-201ENST00000371817 SUCLG1P53597 346 aaKnown RBP14.01□□□□□ -0.17
COL5A1-201ENST00000371817 PIGPP57054 158 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 LMAN2Q12907 356 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 NCMAPQ5T1S8 102 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 UBE2FQ969M7 185 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 AP5S1Q9NUS5 200 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 FITM1A5D6W6 292 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 RPEL1Q2QD12 228 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 LY6G5CQ5SRR4 150 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 DHRS4L2Q6PKH6 230 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 C5orf46Q6UWT4 87 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 PINX1Q96BK5 328 aaKnown RBP14.01□□□□□ -0.17
COL5A1-201ENST00000371817 SLC22A12Q96S37 553 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 GABARAPL1Q9H0R8 117 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 CDCP1Q9H5V8 836 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 DOCK7Q96N67 2140 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 MYO16Q9Y6X6 1858 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 ACOT8O14734 319 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms