RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ATPIF1Q9UII2 106 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 CMAHPQ9Y471 501 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 TEX15Q9BXT5 2789 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 OR6C6A6NF89 314 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 SYNGR3O43761 229 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 ABHD16AO95870 558 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 BMP4P12644 408 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 PCSK6P29122 969 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 GLRXP35754 106 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 POLR2IP36954 125 aaKnown RBP12.8□□□□□ -0.36
COL9A1-204ENST00000370496 RPS27P42677 84 aaKnown RBP12.8□□□□□ -0.36
COL9A1-204ENST00000370496 RAD52P43351 418 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 CDC42P60953 191 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 APOFQ13790 326 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 ZIK1Q3SY52 487 aaPredicted RBP12.8□□□□□ -0.36
COL9A1-204ENST00000370496 CCDC92Q53HC0 331 aaPredicted RBP12.8□□□□□ -0.36
COL9A1-204ENST00000370496 SLC35D3Q5M8T2 416 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 LINC01590Q5TEZ4 76 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 RGS7BPQ6MZT1 257 aaPredicted RBP12.8□□□□□ -0.36
COL9A1-204ENST00000370496 ARL9Q6T311 187 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 TCEANCQ8N8B7 351 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 ABHD4Q8TB40 342 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 FAM81AQ8TBF8 368 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 TMEM163Q8TC26 289 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 ATF6BQ99941 703 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 CACNG6Q9BXT2 260 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 BCL2L14Q9BZR8 327 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 GRIP2Q9C0E4 1043 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 PLK3Q9H4B4 646 aa12.8□□□□□ -0.36
COL9A1-204ENST00000370496 H0YHG0 523 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 ZNF593O00488 134 aaPredicted RBP12.79□□□□□ -0.36
COL9A1-204ENST00000370496 TLX2O43763 284 aaPredicted RBP12.79□□□□□ -0.36
COL9A1-204ENST00000370496 PSKH1P11801 424 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 WNT5AP41221 380 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 UCP2P55851 309 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 HIST1H3AP68431 136 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 ELF3P78545 371 aaPredicted RBP12.79□□□□□ -0.36
COL9A1-204ENST00000370496 HIST2H3PS2Q5TEC6 136 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 C11orf71Q6IPW1 123 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 RFPL4BQ6ZWI9 263 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 HIST2H3AQ71DI3 136 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 DCXRQ7Z4W1 244 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 ZNF101Q8IZC7 436 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 OR1J1Q8NGS3 322 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 IGFBPL1Q8WX77 278 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 SLC7A6Q92536 515 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 PTP4A1Q93096 173 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 IL4I1Q96RQ9 567 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 COQ7Q99807 217 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 FOXC2Q99958 501 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 TOR3AQ9H497 397 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 ELOVL3Q9HB03 270 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 FZR1Q9UM11 496 aa12.79□□□□□ -0.36
COL9A1-204ENST00000370496 CCDC168Q8NDH2 2452 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 A0A1W2PPW3 197 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 B9A039 149 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 SELENOFO60613 162 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 CD8AP01732 235 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 SLC2A5P22732 501 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 PEX2P28328 305 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 NAA10P41227 235 aaPredicted RBP12.78□□□□□ -0.36
COL9A1-204ENST00000370496 PTH2RP49190 550 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 ERVS71-1P61550 626 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 ECH1Q13011 328 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 EIF2B1Q14232 305 aaKnown RBP12.78□□□□□ -0.36
COL9A1-204ENST00000370496 EFNB3Q15768 340 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 LRRC36Q1X8D7 754 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 ZNF771Q7L3S4 317 aaPredicted RBP12.78□□□□□ -0.36
COL9A1-204ENST00000370496 GID4Q8IVV7 300 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 MRPL24Q96A35 216 aaKnown RBP12.78□□□□□ -0.36
COL9A1-204ENST00000370496 TRMT61AQ96FX7 289 aaKnown RBP12.78□□□□□ -0.36
COL9A1-204ENST00000370496 MAP6Q96JE9 813 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 C4orf45Q96LM5 186 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 MBOAT4Q96T53 435 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 SLC29A1Q99808 456 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 COPS4Q9BT78 406 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 DYNLRB1Q9NP97 96 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 H2AFY2Q9P0M6 372 aaPredicted RBP12.78□□□□□ -0.36
COL9A1-204ENST00000370496 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 PMF1-BGLAPU3KQ54 211 aa12.78□□□□□ -0.36
COL9A1-204ENST00000370496 DBHP09172 617 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 ATP5J2P56134 94 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 SELENOVP59797 346 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 PPP1CBP62140 327 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 TAF13Q15543 124 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 TEX30Q5JUR7 227 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 SPATA46Q5T0L3 261 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 NXNL2Q5VZ03 156 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 SHFQ7M4L6 423 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 DPY19L4Q7Z388 723 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 TIGD4Q8IY51 512 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 LRRC75A-AS1Q8N1F1 130 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 GALNT4Q8N4A0 578 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 SPTSSAQ969W0 71 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 MRPL37Q9BZE1 423 aaKnown RBP12.77□□□□□ -0.37
COL9A1-204ENST00000370496 GSX2Q9BZM3 304 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 DCLRE1BQ9H816 532 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 MARCH7Q9H992 704 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 C8orf4Q9NR00 106 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms