RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 NOX3Q9HBY0 568 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 CENPMQ9NSP4 180 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 SCN3BQ9NY72 215 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 CYB5R1Q9UHQ9 305 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 TMEM14AQ9Y6G1 99 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 PHYHO14832 338 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 RER1O15258 196 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 LYNP07948 512 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 MMP7P09237 267 aaPredicted RBP11.01□□□□□ -0.65
EFNA1-201ENST00000368406 SBK2P0C263 348 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 APEX1P27695 318 aaKnown RBP11.01□□□□□ -0.65
EFNA1-201ENST00000368406 HSD11B1P28845 292 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 GDI2P50395 445 aaKnown RBP11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ACTC1P68032 377 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ACTA1P68133 377 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 PSG4Q00888 419 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 MED21Q13503 144 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 TBC1D28Q2M2D7 210 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 KLHL22Q53GT1 634 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ELFN2Q5R3F8 820 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 CFAP77Q6ZQR2 320 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF786Q8N393 782 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 SLC30A7Q8NEW0 376 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 OR4F15Q8NGB8 312 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 OR1J2Q8NGS2 313 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 OTOSQ8NHW6 89 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 SMAP2Q8WU79 429 aaPredicted RBP11.01□□□□□ -0.65
EFNA1-201ENST00000368406 PIK3IP1Q96FE7 263 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 RADILQ96JH8 1075 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 MNTQ99583 582 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ATF6BQ99941 703 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 HDHD2Q9H0R4 259 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 WNT5BQ9H1J7 359 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 B3GNT2Q9NY97 397 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 HAO2Q9NYQ3 351 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 NPAP1Q9NZP6 1156 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 IKZF2Q9UKS7 526 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 PCDHGB1Q9Y5G3 927 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 CREBBPQ92793 2442 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 IGHV1-18A0A0C4DH31 117 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 DAPL1A0PJW8 107 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF878C9JN71 531 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 SIAH2O43255 324 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 FADS2O95864 444 aaKnown RBP11□□□□□ -0.65
EFNA1-201ENST00000368406 CRYAAP02489 173 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 CELA3BP08861 270 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 CECR9P0C854 216 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 STOMP27105 288 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 HCCSP53701 268 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 NR1H2P55055 460 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 GALK2Q01415 458 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 RAB40BQ12829 278 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 BEX5Q5H9J7 111 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 TEX30Q5JUR7 227 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 KCTD18Q6PI47 426 aaPredicted RBP11□□□□□ -0.65
EFNA1-201ENST00000368406 VASH1Q7L8A9 365 aaPredicted RBP11□□□□□ -0.65
EFNA1-201ENST00000368406 KRT77Q7Z794 578 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 CDC20BQ86Y33 519 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 HIST2H2ABQ8IUE6 130 aaPredicted RBP11□□□□□ -0.65
EFNA1-201ENST00000368406 STX19Q8N4C7 294 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF540Q8NDQ6 660 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 OR1F12Q8NHA8 337 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 ASB17Q8WXJ9 295 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 LGALS12Q96DT0 336 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 SLAMF6Q96DU3 332 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 MRPL48Q96GC5 212 aaKnown RBP11□□□□□ -0.65
EFNA1-201ENST00000368406 PLPPR2Q96GM1 343 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 POU2F3Q9UKI9 436 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 BLOC1S6Q9UL45 172 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 EDARQ9UNE0 448 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 AKAP6Q13023 2319 aa11□□□□□ -0.65
EFNA1-201ENST00000368406 ANKRD17O75179 2603 aaKnown RBP11□□□□□ -0.65
EFNA1-201ENST00000368406 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.99□□□□□ -0.65
EFNA1-201ENST00000368406 C5orf49A4QMS7 147 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 OR6C6A6NF89 314 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 EFCAB10A6NFE3 127 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 DENRO43583 198 aaKnown RBP10.99□□□□□ -0.65
EFNA1-201ENST00000368406 XPNPEP2O43895 674 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 IGKV3-15P01624 115 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 SERPINA5P05154 406 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 CD3EP07766 207 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 H2BFMP0C1H6 154 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 OR2T7P0C7T2 308 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 PSKH1P11801 424 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF14P17017 642 aaPredicted RBP10.99□□□□□ -0.65
EFNA1-201ENST00000368406 MYL12AP19105 171 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 PTAFRP25105 342 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 SLC15A1P46059 708 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 SLC6A9P48067 706 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 CXCR4P61073 352 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 CSNK2BP67870 215 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 BSPH1Q075Z2 132 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 ECH1Q13011 328 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 CCDC92Q53HC0 331 aaPredicted RBP10.99□□□□□ -0.65
EFNA1-201ENST00000368406 C6orf141Q5SZD1 244 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 SLC22A25Q6T423 547 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 AHSA2Q719I0 299 aa10.99□□□□□ -0.65
EFNA1-201ENST00000368406 FAM220AQ7Z4H9 259 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms