RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR5H14A6NHG9 310 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 NPIPB9F8W1W9 429 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 GFRA2O00451 464 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CEBPDP49716 269 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 PPOXP50336 477 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MRGPRGQ86SM5 289 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 SYNPRQ8TBG9 265 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM169Q96HH4 297 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 PDGFBP01127 241 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ADORA3P0DMS8 318 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 RBP2P50120 134 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ELLP55199 621 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 LEMD1Q68G75 181 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 TPRG1Q6ZUI0 275 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MS4A6EQ96DS6 147 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 C12orf57Q99622 126 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 SERGEFQ9UGK8 458 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 STEAP1Q9UHE8 339 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 B3GALT1Q9Y5Z6 326 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 IGLV3-10A0A075B6K4 115 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ISLRO14498 428 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 GALR3O60755 368 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 HTD2P86397 168 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 TLE1Q04724 770 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 EIF4EBP2Q13542 120 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 FAM110CQ1W6H9 321 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 LRRC75BQ2VPJ9 315 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CEACAM19Q7Z692 300 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 FUBP1Q96AE4 644 aaKnown RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MYH6P13533 1939 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 TRAV36DV7A0A075B6V5 113 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ZCWPW2A0A1B0GU75 182 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 C7orf72A4D263 438 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CHRM4P08173 479 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 H2AFB1P0C5Y9 115 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 TNFSF8P32971 234 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 RUNX2Q13950 521 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MRPL58Q14197 206 aaKnown RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 SLBPQ14493 270 aaKnown RBP eCLIP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF433Q8N7K0 673 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 OR10P1Q8NGE3 313 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 NUDCD2Q8WVJ2 157 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 GLIS2Q9BZE0 524 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 DNAJC5Q9H3Z4 198 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 SIRT3Q9NTG7 399 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CLEC4EQ9ULY5 219 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 BMPR1BO00238 502 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 OR9G9P0C7N8 305 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CYBAP13498 195 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 NFAM1Q8NET5 270 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 DAZAP1Q96EP5 407 aaKnown RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF385DQ9H6B1 395 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 WSB1Q9Y6I7 421 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 HHLA1C9JL84 531 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CDC14BO60729 498 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 WNT11O96014 354 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PRLHRP49683 370 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CLEC12BQ2HXU8 276 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 Q7L0L9 218 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF611Q8N823 705 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR4F15Q8NGB8 312 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 XAGE5Q8WWM1 108 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 LMLNQ96KR4 655 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CMC2Q9NRP2 79 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 RCE1Q9Y256 329 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GOT2P00505 430 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 IGHA1P01876 353 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR8U8P0C7N1 319 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SSTR4P31391 388 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SRSF2Q01130 221 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF770Q6IQ21 691 aaPredicted RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PPP1R27Q86WC6 154 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 YIPF6Q96EC8 236 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 FEVQ99581 238 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CIPCQ9C0C6 399 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 FBRSL1Q9HCM7 1045 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ASCC3Q8N3C0 2202 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PDE6HQ13956 83 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TECRLQ5HYJ1 363 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR8G2PQ6IF36 304 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PKMYT1Q99640 499 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 Q9N2K0 584 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NAT8Q9UHE5 227 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 YIPF1Q9Y548 306 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 EIF4E2O60573 245 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 AKR1E2Q96JD6 320 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SDHAP31040 664 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 HTR4Q13639 388 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM125Q96AQ2 219 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 MGST2Q99735 147 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 C2orf88Q9BSF0 95 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM191AQ9H0A3 160 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ANXA10Q9UJ72 324 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CLEC2LP0C7M8 214 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 P2RY1P47900 373 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CCR5P51681 352 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 FAM189BP81408 668 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ID2Q02363 134 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PLP2Q04941 152 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GPR17Q13304 367 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms