RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 ZDHHC22Q8N966 263 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 ATG16L2Q8NAA4 619 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 ITLN1Q8WWA0 313 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 DVL3Q92997 716 aaPredicted RBP6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 POP5Q969H6 163 aaKnown RBP6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 CMBLQ96DG6 245 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 HSH2DQ96JZ2 352 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 Q96M85 177 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 GPA33Q99795 319 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 POFUT1Q9H488 388 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 PATZ1Q9HBE1 687 aaKnown RBP6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 ARMCX1Q9P291 453 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 OR5V1Q9UGF6 321 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 IL19Q9UHD0 177 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 STARD10Q9Y365 291 aa6.9□□□□□ -1.3
RNU4-59P-201ENST00000364447 IFNL4K9M1U5 179 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SOCS2O14508 198 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SLC22A2O15244 555 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 KHDRBS3O75525 346 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 NDUFB2O95178 105 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SERPINA1P01009 418 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 RAC2P15153 192 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 CTLA4P16410 223 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 ZNF12P17014 697 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 EGR1P18146 543 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FUT4P22083 530 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SDHAP31040 664 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 MDH2P40926 338 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SLC6A9P48067 706 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 RGS6P49758 472 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SLC7A2P52569 658 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SEC61A1P61619 476 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FOXL1Q12952 345 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 ZNF154Q13106 437 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 ZMYND11Q15326 602 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FGD3Q5JSP0 725 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 GPR139Q6DWJ6 353 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 CGB2Q6NT52 195 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SLC27A4Q6P1M0 643 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 TBPL2Q6SJ96 375 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 Q6ZR03 302 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FAM122BQ7Z309 247 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 ADCK1Q86TW2 530 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 LRRC28Q86X40 367 aaPredicted RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 OR5AS1Q8N127 324 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FAM156AQ8NDB6 213 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 DEFB108BQ8NET1 73 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 OR1F12Q8NHA8 337 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 RP9Q8TA86 221 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SLC7A6Q92536 515 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FAM162AQ96A26 154 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 RASD2Q96D21 266 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 HAVCR1Q96D42 359 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FAM46AQ96IP4 442 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 OR2V2Q96R30 315 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 SYT4Q9H2B2 425 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 ANKRD19PQ9H560 264 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 ZMAT3Q9HA38 289 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 KRCC1Q9NPI7 259 aaPredicted RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 MMP26Q9NRE1 261 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 CMTM6Q9NX76 183 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 PTTG3PQ9NZH4 202 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 GMPR2Q9P2T1 348 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 ATPIF1Q9UII2 106 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 NUP50Q9UKX7 468 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 LRCH1Q9Y2L9 728 aa6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 FAM32AQ9Y421 112 aaKnown RBP6.89□□□□□ -1.31
RNU4-59P-201ENST00000364447 OR6C6A6NF89 314 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 DNAJC9-AS1A6NH13 148 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 A8MXK9 166 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 TRAPPC2LH3BP13 241 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 TMEM178BH3BS89 294 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 J3QW42 95 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 NME4O00746 187 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 RER1O15258 196 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 H1F0P07305 194 aaKnown RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 COX4I1P13073 169 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 RPS2P15880 293 aaKnown RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 H2AFXP16104 143 aaPredicted RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 ZNF26P17031 533 aaPredicted RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 PRTN3P24158 256 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 RBMXP38159 391 aaKnown RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 CENPAP49450 140 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 SRP9P49458 86 aaKnown RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 ERFP50548 548 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 MMP16P51512 607 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 LSM6P62312 80 aaKnown RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 BAMBIQ13145 260 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 HLXQ14774 488 aaPredicted RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 OTPQ5XKR4 325 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 DNM1P34Q6PK57 102 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 SHISA2Q6UWI4 295 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 BTNL3Q6UXE8 466 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 CBLL1Q75N03 491 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 DOK3Q7L591 496 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 SLC15A3Q8IY34 581 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 BHLHE23Q8NDY6 225 aa6.88□□□□□ -1.31
RNU4-59P-201ENST00000364447 OR8G5Q8NG78 346 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms