RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PPM1AP35813 382 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 SURF2Q15527 256 aaPredicted RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 UNQ6494/PRO21346Q6UXR6 183 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 MFSD8Q8NHS3 518 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF563Q8TA94 476 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 RRNAD1Q96FB5 475 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 VSIG4Q9Y279 399 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 EIF1AYO14602 144 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 PHOX2AO14813 284 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 STK17BO94768 372 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 EIF1AXP47813 144 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 RIDAP52758 137 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 ZNHIT3Q15649 155 aaPredicted RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 TMEM35AQ53FP2 167 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 OR2L13Q8N349 312 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 CSNK1A1LQ8N752 337 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 ATG101Q9BSB4 218 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 TCEAL2Q9H3H9 227 aaPredicted RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 TAF9BQ9HBM6 251 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 GAR1Q9NY12 217 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 FRRS1LQ9P0K9 344 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 KCNG2Q9UJ96 466 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 TBX21Q9UL17 535 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 KLHDC2Q9Y2U9 406 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 DMRT1Q9Y5R6 373 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 SOX15O60248 233 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 NDUFB2O95178 105 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 DCDP81605 110 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 GAMTQ14353 236 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 FAM180AQ6UWF9 173 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF813Q6ZN06 617 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 SYS1Q8N2H4 156 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF619Q8N2I2 560 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 POMGNT2Q8NAT1 580 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 CLEC1AQ8NC01 280 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 OR51F2Q8NH61 342 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 NRSN2Q9GZP1 204 aa11.48□□□□□ -0.57
VAMP1-201ENST00000361716 METTL1Q9UBP6 276 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 MRPS2Q9Y399 296 aaKnown RBP11.48□□□□□ -0.57
VAMP1-201ENST00000361716 PHYHO14832 338 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF749O43361 778 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 FGF17O60258 216 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 GIMD1P0DJR0 217 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 NPY4RP50391 375 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 EMDP50402 254 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 VWA2Q5GFL6 755 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 ANKRD16Q6P6B7 361 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 TMEM64Q6YI46 380 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 OR52R1Q8NGF1 315 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 OR2G2Q8NGZ5 317 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 MARCH1Q8TCQ1 289 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 GPR148Q8TDV2 347 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 SLC25A21Q9BQT8 299 aaPredicted RBP11.47□□□□□ -0.57
VAMP1-201ENST00000361716 ETV7Q9Y603 341 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 CSTAP01040 98 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 DBIP07108 87 aaKnown RBP11.47□□□□□ -0.57
VAMP1-201ENST00000361716 FABP4P15090 132 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF84P51523 738 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 CAV2P51636 162 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 ELOCQ15369 112 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 RPL13AP3Q6NVV1 102 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 TRAPPC6BQ86SZ2 158 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 COMMD2Q86X83 199 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 MITD1Q8WV92 249 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 MARS2Q96GW9 593 aaKnown RBP11.47□□□□□ -0.57
VAMP1-201ENST00000361716 C14orf144Q96I85 54 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 GAL3ST4Q96RP7 486 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 SMOC1Q9H4F8 434 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 TREM2Q9NZC2 230 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF705GA8MUZ8 300 aaPredicted RBP11.47□□□□□ -0.57
VAMP1-201ENST00000361716 UMAD1C9J7I0 102 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 TERTO14746 1132 aaKnown RBP11.47□□□□□ -0.57
VAMP1-201ENST00000361716 TCAPO15273 167 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 SPINT1O43278 529 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 RDH16O75452 317 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 GNALP38405 381 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 GRK6P43250 576 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 DIO1P49895 249 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 CTXN1P60606 82 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 LYG2Q86SG7 212 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 SFTPA2Q8IWL1 248 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 PRR22Q8IZ63 422 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 ZSCAN4Q8NAM6 433 aaPredicted RBP11.47□□□□□ -0.57
VAMP1-201ENST00000361716 SEH1LQ96EE3 360 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 OR5AC2Q9NZP5 309 aa11.47□□□□□ -0.57
VAMP1-201ENST00000361716 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 TSTD3H0UI37 97 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 MBTPS2O43462 519 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 CYTIPO60759 359 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF354AO60765 605 aaPredicted RBP11.46□□□□□ -0.57
VAMP1-201ENST00000361716 OR2C1O95371 312 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 CD74P04233 296 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 ITGB2P05107 769 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 RGS19P49795 217 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 C1orf61Q13536 156 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 ENPP2Q13822 863 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 RUNX2Q13950 521 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms