RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 EBPQ15125 230 aaKnown RBP6.54□□□□□ -1.36
CLCN3-202ENST00000360642 TOMM34Q15785 309 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-202ENST00000360642 DEFB133Q30KQ1 61 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 C14orf28Q4W4Y0 310 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 ELFN2Q5R3F8 820 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 THOC7Q6I9Y2 204 aaKnown RBP6.54□□□□□ -1.36
CLCN3-202ENST00000360642 NANOGNBQ7Z5D8 188 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 DND1Q8IYX4 353 aaKnown RBP6.54□□□□□ -1.36
CLCN3-202ENST00000360642 PRR22Q8IZ63 422 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 PRSS35Q8N3Z0 413 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 OR11H4Q8NGC9 324 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 OR52I2Q8NH67 350 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 MIB2Q96AX9 1013 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 PTDSS2Q9BVG9 487 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 C20orf85Q9H1P6 137 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 GCM1Q9NP62 436 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 STMN3Q9NZ72 180 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 PTTG3PQ9NZH4 202 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 EMC3Q9P0I2 261 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 NPTNQ9Y639 398 aa6.54□□□□□ -1.36
CLCN3-202ENST00000360642 FREM2Q5SZK8 3169 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 A0A1B0GTH9 108 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 TVP23AA6NH52 213 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 HSPB2A8KAH6 182 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 H3BSH0 61 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 CDC40O60508 579 aaKnown RBP eCLIP6.53□□□□□ -1.36
CLCN3-202ENST00000360642 EIF4E2O60573 245 aaKnown RBP6.53□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF254O75437 659 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 TPPPO94811 219 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 RAF1P04049 648 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 CLDN12P56749 244 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 GNG2P59768 71 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 CFHR1Q03591 330 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 HSPB2Q16082 182 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 C1QL3Q5VWW1 255 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 LINGO2Q7L985 606 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-202ENST00000360642 OR2G2Q8NGZ5 317 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 SYNPRQ8TBG9 265 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 NSMAFQ92636 917 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 PHF21AQ96BD5 680 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 S100A16Q96FQ6 103 aaKnown RBP6.53□□□□□ -1.36
CLCN3-202ENST00000360642 KLHL15Q96M94 604 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 SYT4Q9H2B2 425 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 KLHL9Q9P2J3 617 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 KLK11Q9UBX7 282 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 LAMP5Q9UJQ1 280 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 ETV7Q9Y603 341 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 TRAV36DV7A0A075B6V5 113 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 ANKRD20A5PA0PJZ0 165 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 NAP1L6A6NFF2 107 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 C17orf51A8MQB3 221 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 NPIPB7O75200 414 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF432O94892 652 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 TGM6O95932 706 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 RENP00797 406 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 HIST1H2ABP04908 130 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 P2RX1P51575 399 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 MRPS10P82664 201 aaKnown RBP6.53□□□□□ -1.36
CLCN3-202ENST00000360642 CAMK2DQ13557 499 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 OLFML2AQ68BL7 652 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 HIST3H2AQ7L7L0 130 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 DPY19L4Q7Z388 723 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 MARCH3Q86UD3 253 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 SERPINA12Q8IW75 414 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 CARFQ8N187 725 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF441Q8N8Z8 693 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 CADM4Q8NFZ8 388 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 OTOSQ8NHW6 89 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 CEP76Q8TAP6 659 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 FCAMRQ8WWV6 532 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 HIST1H2ACQ93077 130 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 MCHR2Q969V1 340 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 INTS14Q96SY0 518 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 LMAN1LQ9HAT1 526 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 PLSCR4Q9NRQ2 329 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 SEMA5BQ9P283 1151 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 DHCR7Q9UBM7 475 aaKnown RBP6.53□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF222Q9UK12 451 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 MGAT4AQ9UM21 535 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 TMEM14AQ9Y6G1 99 aa6.53□□□□□ -1.36
CLCN3-202ENST00000360642 TRAV8-7A0A075B6U6 113 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 A0A1B0GVI7 797 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 TMEM212A6NML5 194 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ADAM10O14672 748 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 PHYHO14832 338 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 HCRTR2O43614 444 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 KRT33AO76009 404 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 LDOC1O95751 146 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 GPANK1O95872 356 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 WNT11O96014 354 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 MT-ATP6P00846 226 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 PSMB1P20618 241 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 CDK2P24941 298 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ART1P52961 327 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ZP1P60852 638 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 PRAMEF17Q5VTA0 474 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 PM20D2Q8IYS1 436 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 D2HGDHQ8N465 521 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 LINC00482Q8N8I6 264 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms